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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Abp1. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytoskeleton 4.3594E-5 7 216 4 6292
actin cytoskeleton 8.0099E-5 7 85 3 6292
cell cortex 1.6829E-4 7 109 3 6292
actin cortical patch 8.5225E-4 7 41 2 6292
cytoskeletal part 1.0223E-3 7 201 3 6292
cortical actin cytoskeleton 1.3701E-3 7 52 2 6292
cortical cytoskeleton 1.3701E-3 7 52 2 6292
cell cortex part 4.6027E-3 7 96 2 6292
Arp2/3 protein complex 7.7654E-3 7 7 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

actin cytoskeleton organization 3.3125E-6 7 113 4 6292
actin filament-based process 3.8082E-6 7 117 4 6292
actin filament organization 4.0976E-5 7 68 3 6292
cytoskeleton organization 5.6794E-5 7 231 4 6292
cellular component organization 1.3786E-3 7 1582 6 6292
organelle organization 2.7877E-3 7 1127 5 6292
nucleosome positioning 3.3344E-3 7 3 1 6292
cellular component assembly 6.6113E-3 7 385 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

actin binding 2.2059E-4 7 21 2 6292
cytoskeletal protein binding 1.7614E-3 7 59 2 6292
general transcriptional repressor activity 2.224E-3 7 2 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle