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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Lsb3. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 9 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein kinase CK2 complex 5.7106E-3 9 4 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

regulation of transcription from RNA polymerase I promoter 5.7106E-3 9 4 1 6292
regulation of transcription from RNA polymerase III promoter 9.9746E-3 9 7 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

shikimate 5-dehydrogenase activity 1.4304E-3 9 1 1 6292
3-phosphoshikimate 1-carboxyvinyltransferase activity 1.4304E-3 9 1 1 6292
shikimate kinase activity 1.4304E-3 9 1 1 6292
3-dehydroquinate dehydratase activity 1.4304E-3 9 1 1 6292
3-dehydroquinate synthase activity 1.4304E-3 9 1 1 6292
protein kinase CK2 regulator activity 2.859E-3 9 2 1 6292
carbon-oxygen lyase activity, acting on phosphates 4.2857E-3 9 3 1 6292
oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor 7.1338E-3 9 5 1 6292
succinate dehydrogenase (ubiquinone) activity 7.1338E-3 9 5 1 6292
succinate dehydrogenase activity 7.1338E-3 9 5 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle