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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Lif1. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

response to stress 3.8497E-5 4 497 4 6292
double-strand break repair via nonhomologous end joining 9.0505E-5 4 25 2 6292
non-recombinational repair 1.6892E-4 4 34 2 6292
response to DNA damage stimulus 2.027E-4 4 236 3 6292
response to stimulus 2.1816E-4 4 766 4 6292
cellular response to stress 3.7451E-4 4 290 3 6292
double-strand break repair 4.7822E-4 4 57 2 6292
cellular response to stimulus 8.288E-4 4 379 3 6292
DNA metabolic process 2.9778E-3 4 585 3 6292
DNA repair 5.3374E-3 4 192 2 6292
DNA damage response, signal transduction 8.8726E-3 4 14 1 6292
DNA damage checkpoint 8.8726E-3 4 14 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

DNA ligase (ATP) activity 1.2712E-3 4 2 1 6292
DNA ligase activity 1.2712E-3 4 2 1 6292
ligase activity, forming phosphoric ester bonds 2.5411E-3 4 4 1 6292
thioredoxin peroxidase activity 5.7106E-3 4 9 1 6292
peroxiredoxin activity 5.7106E-3 4 9 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle