| From Publication: | Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3. |
| Notes: | This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Met18. The topolgies of protein complexes in this experiment are unknown. |
| Complex Size: | 4 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| organelle lumen | 4.2376E-3 | 4 | 660 | 3 | 6292 |
| intracellular organelle lumen | 4.2376E-3 | 4 | 660 | 3 | 6292 |
| nucleotide-excision repair factor 3 complex | 4.4437E-3 | 4 | 7 | 1 | 6292 |
| fungal-type vacuole lumen | 4.4437E-3 | 4 | 7 | 1 | 6292 |
| membrane-enclosed lumen | 5.0309E-3 | 4 | 700 | 3 | 6292 |
| vacuolar lumen | 5.7106E-3 | 4 | 9 | 1 | 6292 |
| holo TFIIH complex | 6.3436E-3 | 4 | 10 | 1 | 6292 |
| nucleoplasm | 9.9491E-3 | 4 | 264 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| response to stress | 3.8497E-5 | 4 | 497 | 4 | 6292 |
| nucleotide-excision repair | 2.115E-4 | 4 | 38 | 2 | 6292 |
| response to stimulus | 2.1816E-4 | 4 | 766 | 4 | 6292 |
| cellular response to stress | 3.7451E-4 | 4 | 290 | 3 | 6292 |
| cellular response to stimulus | 8.288E-4 | 4 | 379 | 3 | 6292 |
| nucleotide-excision repair, DNA duplex unwinding | 3.8098E-3 | 4 | 6 | 1 | 6292 |
| negative regulation of transcription from RNA polymerase II promoter, mitotic | 5.0773E-3 | 4 | 8 | 1 | 6292 |
| regulation of transcription from RNA polymerase II promoter, mitotic | 5.0773E-3 | 4 | 8 | 1 | 6292 |
| DNA repair | 5.3374E-3 | 4 | 192 | 2 | 6292 |
| regulation of transcription, mitotic | 5.7106E-3 | 4 | 9 | 1 | 6292 |
| negative regulation of transcription, mitotic | 5.7106E-3 | 4 | 9 | 1 | 6292 |
| response to DNA damage stimulus | 7.9954E-3 | 4 | 236 | 2 | 6292 |
| vacuolar protein catabolic process | 8.8726E-3 | 4 | 14 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| cAMP-dependent protein kinase inhibitor activity | 6.3573E-4 | 4 | 1 | 1 | 6292 |
| RNA polymerase II transcription factor activity | 2.4736E-3 | 4 | 130 | 2 | 6292 |
| protein serine/threonine kinase inhibitor activity | 2.5411E-3 | 4 | 4 | 1 | 6292 |
| serine-type endopeptidase activity | 2.5411E-3 | 4 | 4 | 1 | 6292 |
| serine-type peptidase activity | 3.8098E-3 | 4 | 6 | 1 | 6292 |
| protein kinase inhibitor activity | 6.9763E-3 | 4 | 11 | 1 | 6292 |
| kinase inhibitor activity | 6.9763E-3 | 4 | 11 | 1 | 6292 |
| serine hydrolase activity | 8.2408E-3 | 4 | 13 | 1 | 6292 |