| From Publication: | Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3. |
| Notes: | This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Kap104. The topolgies of protein complexes in this experiment are unknown. |
| Complex Size: | 7 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| nuclear lumen | 7.7894E-4 | 7 | 453 | 4 | 6292 |
| nucleolus | 1.1777E-3 | 7 | 211 | 3 | 6292 |
| organelle lumen | 3.2392E-3 | 7 | 660 | 4 | 6292 |
| intracellular organelle lumen | 3.2392E-3 | 7 | 660 | 4 | 6292 |
| nuclear outer membrane | 3.7089E-3 | 7 | 86 | 2 | 6292 |
| membrane-enclosed lumen | 4.0336E-3 | 7 | 700 | 4 | 6292 |
| nuclear membrane | 4.6971E-3 | 7 | 97 | 2 | 6292 |
| nucleus | 5.8629E-3 | 7 | 2041 | 6 | 6292 |
| preribosome, small subunit precursor | 6.6592E-3 | 7 | 6 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| RNA processing | 1.4865E-5 | 7 | 380 | 5 | 6292 |
| mRNA polyadenylation | 1.7981E-4 | 7 | 19 | 2 | 6292 |
| rRNA processing | 2.7117E-4 | 7 | 128 | 3 | 6292 |
| rRNA metabolic process | 3.3156E-4 | 7 | 137 | 3 | 6292 |
| RNA polyadenylation | 3.4048E-4 | 7 | 26 | 2 | 6292 |
| mRNA 3'-end processing | 4.8586E-4 | 7 | 31 | 2 | 6292 |
| RNA 3'-end processing | 8.9439E-4 | 7 | 42 | 2 | 6292 |
| mRNA metabolic process | 1.2105E-3 | 7 | 213 | 3 | 6292 |
| ncRNA processing | 1.2438E-3 | 7 | 215 | 3 | 6292 |
| RNA metabolic process | 1.2754E-3 | 7 | 954 | 5 | 6292 |
| ncRNA metabolic process | 2.0862E-3 | 7 | 257 | 3 | 6292 |
| ribosome biogenesis | 4.8878E-3 | 7 | 346 | 3 | 6292 |
| gene expression | 5.0816E-3 | 7 | 1283 | 5 | 6292 |
| ribonucleoprotein complex biogenesis | 6.0923E-3 | 7 | 374 | 3 | 6292 |
| poly(A)+ mRNA export from nucleus | 7.7654E-3 | 7 | 7 | 1 | 6292 |
| nucleic acid metabolic process | 7.9545E-3 | 7 | 1415 | 5 | 6292 |
| nuclear transport | 8.3115E-3 | 7 | 130 | 2 | 6292 |
| nucleocytoplasmic transport | 8.3115E-3 | 7 | 130 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| rRNA (adenine-N6,N6-)-dimethyltransferase activity | 1.1125E-3 | 7 | 1 | 1 | 6292 |
| rRNA (adenine) methyltransferase activity | 1.1125E-3 | 7 | 1 | 1 | 6292 |
| nuclear localization sequence binding | 3.3344E-3 | 7 | 3 | 1 | 6292 |
| poly-purine tract binding | 5.552E-3 | 7 | 5 | 1 | 6292 |
| poly(A) RNA binding | 5.552E-3 | 7 | 5 | 1 | 6292 |
| rRNA methyltransferase activity | 5.552E-3 | 7 | 5 | 1 | 6292 |
| single-stranded RNA binding | 5.552E-3 | 7 | 5 | 1 | 6292 |
| RNA binding | 5.7756E-3 | 7 | 367 | 3 | 6292 |