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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Snf4. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

AMP-activated protein kinase complex 1.1349E-5 6 6 2 6292
nuclear envelope lumen 3.8098E-3 6 4 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

positive regulation of gluconeogenesis 3.8098E-3 6 4 1 6292
protein amino acid phosphorylation 3.8138E-3 6 103 2 6292
glucose metabolic process 4.2624E-3 6 109 2 6292
hexose metabolic process 5.4872E-3 6 124 2 6292
monosaccharide metabolic process 6.4777E-3 6 135 2 6292
glycogen catabolic process 6.6592E-3 6 7 1 6292
glucan catabolic process 7.6075E-3 6 8 1 6292
positive regulation of glucose metabolic process 7.6075E-3 6 8 1 6292
positive regulation of cellular carbohydrate metabolic process 7.6075E-3 6 8 1 6292
positive regulation of carbohydrate metabolic process 7.6075E-3 6 8 1 6292
cellular polysaccharide catabolic process 8.5551E-3 6 9 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

AMP-activated protein kinase activity 1.1349E-5 6 6 2 6292
protein kinase activity 2.8306E-4 6 156 3 6292
phosphotransferase activity, alcohol group as acceptor 5.7233E-4 6 198 3 6292
kinase activity 8.0097E-4 6 222 3 6292
glycogen phosphorylase activity 9.5359E-4 6 1 1 6292
phosphorylase activity 9.5359E-4 6 1 1 6292
protein serine/threonine kinase activator activity 1.9064E-3 6 2 1 6292
protein serine/threonine kinase activity 2.9883E-3 6 91 2 6292
transferase activity 3.1028E-3 6 797 4 6292
transferase activity, transferring phosphorus-containing groups 5.0732E-3 6 420 3 6292
protein kinase activator activity 8.5551E-3 6 9 1 6292
kinase activator activity 9.5019E-3 6 10 1 6292

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