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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

NADPH regeneration 3.1744E-5 4 15 2 6292
NADP metabolic process 4.6226E-5 4 18 2 6292
gluconeogenesis 1.5902E-4 4 33 2 6292
hexose biosynthetic process 1.7912E-4 4 35 2 6292
monosaccharide biosynthetic process 2.115E-4 4 38 2 6292
nicotinamide nucleotide metabolic process 2.7138E-4 4 43 2 6292
pyruvate metabolic process 2.8424E-4 4 44 2 6292
pyridine nucleotide metabolic process 3.1085E-4 4 46 2 6292
alcohol biosynthetic process 3.246E-4 4 47 2 6292
oxidoreduction coenzyme metabolic process 5.1246E-4 4 59 2 6292
cellular carbohydrate biosynthetic process 8.9579E-4 4 78 2 6292
carbohydrate biosynthetic process 1.2181E-3 4 91 2 6292
glucose metabolic process 1.7442E-3 4 109 2 6292
coenzyme metabolic process 2.1108E-3 4 120 2 6292
hexose metabolic process 2.2525E-3 4 124 2 6292
nucleotide metabolic process 2.3988E-3 4 128 2 6292
nucleoside phosphate metabolic process 2.3988E-3 4 128 2 6292
monocarboxylic acid metabolic process 2.6265E-3 4 134 2 6292
monosaccharide metabolic process 2.6654E-3 4 135 2 6292
cofactor metabolic process 3.4575E-3 4 154 2 6292
nucleobase, nucleoside and nucleotide metabolic process 3.5916E-3 4 157 2 6292
budding cell isotropic bud growth 5.0773E-3 4 8 1 6292
actin polymerization or depolymerization 5.7106E-3 4 9 1 6292
budding cell apical bud growth 6.3436E-3 4 10 1 6292
intracellular mRNA localization 6.3436E-3 4 10 1 6292
reproduction of a single-celled organism 6.7852E-3 4 217 2 6292
alcohol metabolic process 6.97E-3 4 220 2 6292
vacuole inheritance 9.5041E-3 4 15 1 6292
cellular carbohydrate metabolic process 9.8029E-3 4 262 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

pyruvate carboxylase activity 3.0316E-7 4 2 2 6292
ligase activity, forming carbon-carbon bonds 1.8182E-6 4 4 2 6292
actin lateral binding 1.2712E-3 4 2 1 6292
ligase activity 3.2825E-3 4 150 2 6292
actin filament binding 7.6087E-3 4 12 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle