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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

proteasome complex 5.6165E-4 5 48 2 6292
CCR4-NOT core complex 6.3431E-3 5 8 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein ubiquitination 5.1484E-8 5 65 4 6292
protein modification by small protein conjugation 1.6105E-7 5 86 4 6292
protein polyubiquitination 3.1914E-7 5 21 3 6292
protein modification by small protein conjugation or removal 5.0423E-7 5 114 4 6292
post-translational protein modification 4.8711E-5 5 357 4 6292
protein monoubiquitination 1.2698E-4 5 23 2 6292
protein modification process 1.8329E-4 5 499 4 6292
macromolecule modification 3.0739E-4 5 569 4 6292
sexual reproduction 4.7442E-4 5 233 3 6292
reproduction 1.2977E-3 5 328 3 6292
endocytosis 1.8818E-3 5 88 2 6292
membrane invagination 2.1446E-3 5 94 2 6292
sexual sporulation 3.0323E-3 5 112 2 6292
sexual sporulation resulting in formation of a cellular spore 3.0323E-3 5 112 2 6292
cell development 3.0323E-3 5 112 2 6292
ascospore formation 3.0323E-3 5 112 2 6292
cellular protein metabolic process 3.6498E-3 5 1074 4 6292
sporulation 3.7649E-3 5 125 2 6292
sporulation resulting in formation of a cellular spore 3.7649E-3 5 125 2 6292
anatomical structure formation involved in morphogenesis 4.0056E-3 5 129 2 6292
reproductive process in single-celled organism 4.3164E-3 5 134 2 6292
protein metabolic process 4.528E-3 5 1136 4 6292
cell differentiation 5.2455E-3 5 148 2 6292
reproductive developmental process 5.4558E-3 5 151 2 6292
lipid translocation 5.552E-3 5 7 1 6292
phospholipid translocation 5.552E-3 5 7 1 6292
nuclear-transcribed mRNA poly(A) tail shortening 6.3431E-3 5 8 1 6292
cellular membrane organization 9.2543E-3 5 198 2 6292
membrane organization 9.2543E-3 5 198 2 6292
phospholipid transport 9.5026E-3 5 12 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ubiquitin-protein ligase activity 3.0068E-8 5 57 4 6292
small conjugating protein ligase activity 4.2436E-8 5 62 4 6292
acid-amino acid ligase activity 7.3829E-8 5 71 4 6292
ligase activity, forming carbon-nitrogen bonds 2.3103E-7 5 94 4 6292
ligase activity 1.5239E-6 5 150 4 6292
catalytic activity 4.6443E-3 5 2150 5 6292
phospholipid-translocating ATPase activity 7.1338E-3 5 9 1 6292

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