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View Protein Complex Details

Complex Overview

From Publication: Mewes, H. W. et al. MIPS: Analysis and annotation of proteins from whole genomes. Nucleic Acids Res. 32, D41-D44
Notes: MIPS hand-curated complex set. MIPS complex ID: 440.30.10.10
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

spliceosomal complex 1.4938E-4 3 45 2 6292
ribonucleoprotein complex 5.4224E-4 3 514 3 6292
nuclear part 5.3751E-3 3 1103 3 6292
U2 snRNP 6.1865E-3 3 13 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear mRNA splicing, via spliceosome 3.7798E-6 3 99 3 6292
RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 3.8967E-6 3 100 3 6292
RNA splicing, via transesterification reactions 4.7832E-6 3 107 3 6292
RNA splicing 9.0288E-6 3 132 3 6292
mRNA processing 1.4956E-5 3 156 3 6292
mRNA metabolic process 3.8268E-5 3 213 3 6292
RNA processing 2.1865E-4 3 380 3 6292
RNA metabolic process 3.4763E-3 3 954 3 6292
gene expression 8.4626E-3 3 1283 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

first spliceosomal transesterification activity 2.8585E-3 3 6 1 6292
binding 8.6823E-3 3 1294 3 6292
RNA binding 9.7865E-3 3 367 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle