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View Protein Complex Details

Complex Overview

From Publication: Mewes, H. W. et al. MIPS: Analysis and annotation of proteins from whole genomes. Nucleic Acids Res. 32, D41-D44
Notes: MIPS hand-curated complex set. MIPS complex ID: 260.50.10
Complex Size: 8 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Golgi trans cisterna 1.4121E-5 8 5 2 6292
early endosome 1.4121E-5 8 5 2 6292
Golgi apparatus 3.3864E-5 8 171 4 6292
trans-Golgi network 1.0958E-4 8 13 2 6292
Golgi stack 1.6826E-4 8 16 2 6292
Golgi cisterna 1.6826E-4 8 16 2 6292
organelle subcompartment 1.6826E-4 8 16 2 6292
endosome 1.713E-4 8 94 3 6292
Golgi apparatus part 3.447E-4 8 119 3 6292
SNARE complex 3.8101E-3 8 3 1 6292
membrane part 6.0097E-3 8 662 4 6292
cytoplasmic part 7.7532E-3 8 2482 7 6292
endoplasmic reticulum 8.6448E-3 8 364 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

membrane fusion 8.9361E-14 8 67 7 6292
cellular membrane fusion 8.9361E-14 8 67 7 6292
vesicle fusion 1.5374E-13 8 29 6 6292
vesicle organization 3.0174E-12 8 46 6 6292
organelle fusion 8.3017E-12 8 54 6 6292
vesicle-mediated transport 6.7208E-11 8 340 8 6292
cellular membrane organization 2.1448E-10 8 198 7 6292
membrane organization 2.1448E-10 8 198 7 6292
Golgi vesicle transport 8.8861E-9 8 168 6 6292
transport 3.8811E-7 8 997 8 6292
establishment of localization 4.2385E-7 8 1008 8 6292
localization 6.347E-7 8 1060 8 6292
retrograde vesicle-mediated transport, Golgi to ER 3.4609E-6 8 26 3 6292
intracellular transport 1.0782E-5 8 553 6 6292
establishment of localization in cell 1.7216E-5 8 599 6 6292
cellular localization 2.6045E-5 8 643 6 6292
post-Golgi vesicle-mediated transport 6.5054E-5 8 68 3 6292
cellular component organization 3.9282E-4 8 1582 7 6292
Golgi to plasma membrane transport 6.4583E-4 8 31 2 6292
organelle organization 6.5677E-4 8 1127 6 6292
ascospore-type prospore formation 5.0773E-3 8 4 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

receptor signaling protein serine/threonine kinase activity 4.9891E-19 8 36 8 6292
receptor signaling protein activity 6.3653E-19 8 37 8 6292
molecular transducer activity 4.7792E-16 8 80 8 6292
signal transducer activity 4.7792E-16 8 80 8 6292
protein serine/threonine kinase activity 1.4012E-15 8 91 8 6292
protein kinase activity 1.1951E-13 8 156 8 6292
phosphotransferase activity, alcohol group as acceptor 8.3703E-13 8 198 8 6292
kinase activity 2.1235E-12 8 222 8 6292
transferase activity, transferring phosphorus-containing groups 3.7025E-10 8 420 8 6292
transferase activity 6.4267E-8 8 797 8 6292
catalytic activity 1.8428E-4 8 2150 8 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle