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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

termination of RNA polymerase II transcription, poly(A)-coupled 2.8918E-9 3 10 3 6292
termination of RNA polymerase II transcription 2.3352E-8 3 19 3 6292
transcription termination 3.2051E-8 3 21 3 6292
cellular protein complex disassembly 2.2024E-7 3 39 3 6292
protein complex disassembly 2.2024E-7 3 39 3 6292
cellular macromolecular complex disassembly 2.3809E-7 3 40 3 6292
macromolecular complex disassembly 2.3809E-7 3 40 3 6292
cellular component disassembly 3.1916E-7 3 44 3 6292
cellular macromolecular complex subunit organization 6.8975E-5 3 259 3 6292
transcription from RNA polymerase II promoter 1.4965E-4 3 335 3 6292
macromolecular complex subunit organization 1.8121E-4 3 357 3 6292
transcription, DNA-dependent 5.081E-4 3 503 3 6292
RNA biosynthetic process 5.2344E-4 3 508 3 6292
transcription 6.7188E-4 3 552 3 6292
RNA metabolic process 3.4763E-3 3 954 3 6292
regulation of transposition, DNA-mediated 3.8101E-3 3 8 1 6292
negative regulation of transposition, DNA-mediated 3.8101E-3 3 8 1 6292
transposition, DNA-mediated 3.8101E-3 3 8 1 6292
negative regulation of transposition 4.2857E-3 3 9 1 6292
regulation of transposition 4.2857E-3 3 9 1 6292
negative regulation of DNA recombination 5.7116E-3 3 12 1 6292
cellular macromolecule biosynthetic process 6.7003E-3 3 1187 3 6292
macromolecule biosynthetic process 6.7343E-3 3 1189 3 6292
regulation of DNA recombination 7.136E-3 3 15 1 6292
processing of 27S pre-rRNA 7.6106E-3 3 16 1 6292
gene expression 8.4626E-3 3 1283 3 6292
negative regulation of DNA metabolic process 9.9809E-3 3 21 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

5'-3' exoribonuclease activity 9.5344E-4 3 2 1 6292
5'-3' exonuclease activity 2.8585E-3 3 6 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle