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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

peptidyl-diphthamide metabolic process 9.6371E-10 4 5 3 6292
peptidyl-diphthamide biosynthetic process from peptidyl-histidine 9.6371E-10 4 5 3 6292
peptidyl-histidine modification 9.6371E-10 4 5 3 6292
peptidyl-amino acid modification 2.8115E-7 4 27 3 6292
macromolecule modification 6.624E-5 4 569 4 6292
tRNA modification 3.8253E-4 4 51 2 6292
RNA modification 7.2162E-4 4 70 2 6292
tRNA processing 1.014E-3 4 83 2 6292
protein modification process 1.8668E-3 4 499 3 6292
tRNA metabolic process 2.1108E-3 4 120 2 6292
ncRNA processing 6.6633E-3 4 215 2 6292
ncRNA metabolic process 9.4419E-3 4 257 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle