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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

preribosome, small subunit precursor 4.7604E-3 5 6 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mRNA polyadenylation 8.5935E-5 5 19 2 6292
RNA polyadenylation 1.6296E-4 5 26 2 6292
mRNA 3'-end processing 2.3279E-4 5 31 2 6292
RNA 3'-end processing 4.2953E-4 5 42 2 6292
RNA processing 1.9946E-3 5 380 3 6292
nuclear transport 4.0668E-3 5 130 2 6292
nucleocytoplasmic transport 4.0668E-3 5 130 2 6292
poly(A)+ mRNA export from nucleus 5.552E-3 5 7 1 6292
mRNA processing 5.815E-3 5 156 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

RNA binding 1.8021E-3 5 367 3 6292
nuclear localization sequence binding 2.3825E-3 5 3 1 6292
poly-purine tract binding 3.9682E-3 5 5 1 6292
poly(A) RNA binding 3.9682E-3 5 5 1 6292
single-stranded RNA binding 3.9682E-3 5 5 1 6292
binding 7.4489E-3 5 1294 4 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle