| From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
| Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
| Complex Size: | 8 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| nuclear outer membrane | 2.3012E-8 | 8 | 86 | 5 | 6292 |
| nuclear membrane | 4.2397E-8 | 8 | 97 | 5 | 6292 |
| outer membrane | 8.9582E-7 | 8 | 178 | 5 | 6292 |
| organelle outer membrane | 8.9582E-7 | 8 | 178 | 5 | 6292 |
| nuclear envelope | 1.5606E-6 | 8 | 199 | 5 | 6292 |
| nucleolus | 2.0872E-6 | 8 | 211 | 5 | 6292 |
| nuclear membrane-endoplasmic reticulum network | 3.3401E-6 | 8 | 232 | 5 | 6292 |
| ribonucleoprotein complex | 7.018E-6 | 8 | 514 | 6 | 6292 |
| preribosome | 7.9274E-6 | 8 | 34 | 3 | 6292 |
| non-membrane-bounded organelle | 1.3016E-5 | 8 | 959 | 7 | 6292 |
| intracellular non-membrane-bounded organelle | 1.3016E-5 | 8 | 959 | 7 | 6292 |
| endomembrane system | 4.7184E-5 | 8 | 398 | 5 | 6292 |
| small nucleolar ribonucleoprotein complex | 7.7231E-5 | 8 | 72 | 3 | 6292 |
| nuclear lumen | 8.8346E-5 | 8 | 453 | 5 | 6292 |
| envelope | 1.4914E-4 | 8 | 505 | 5 | 6292 |
| organelle envelope | 1.4914E-4 | 8 | 505 | 5 | 6292 |
| organelle lumen | 5.3463E-4 | 8 | 660 | 5 | 6292 |
| intracellular organelle lumen | 5.3463E-4 | 8 | 660 | 5 | 6292 |
| membrane part | 5.4233E-4 | 8 | 662 | 5 | 6292 |
| organelle membrane | 6.6856E-4 | 8 | 692 | 5 | 6292 |
| membrane-enclosed lumen | 7.0576E-4 | 8 | 700 | 5 | 6292 |
| macromolecular complex | 5.1894E-3 | 8 | 1635 | 6 | 6292 |
| nuclear part | 5.7545E-3 | 8 | 1103 | 5 | 6292 |
| small-subunit processome | 7.6075E-3 | 8 | 6 | 1 | 6292 |
| nuclear microtubule | 7.6075E-3 | 8 | 6 | 1 | 6292 |
| preribosome, small subunit precursor | 7.6075E-3 | 8 | 6 | 1 | 6292 |
| membrane | 8.3295E-3 | 8 | 1198 | 5 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| rRNA processing | 1.7081E-9 | 8 | 128 | 6 | 6292 |
| rRNA metabolic process | 2.5819E-9 | 8 | 137 | 6 | 6292 |
| ribosome biogenesis | 1.094E-8 | 8 | 346 | 7 | 6292 |
| ribonucleoprotein complex biogenesis | 1.8872E-8 | 8 | 374 | 7 | 6292 |
| ncRNA processing | 3.9303E-8 | 8 | 215 | 6 | 6292 |
| ncRNA metabolic process | 1.1463E-7 | 8 | 257 | 6 | 6292 |
| RNA processing | 1.1789E-6 | 8 | 380 | 6 | 6292 |
| cellular component biogenesis | 1.3986E-6 | 8 | 694 | 7 | 6292 |
| maturation of SSU-rRNA | 4.2427E-5 | 8 | 59 | 3 | 6292 |
| gene expression | 9.518E-5 | 8 | 1283 | 7 | 6292 |
| RNA metabolic process | 2.5461E-4 | 8 | 954 | 6 | 6292 |
| nucleic acid metabolic process | 2.3473E-3 | 8 | 1415 | 6 | 6292 |
| nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | 4.1016E-3 | 8 | 1566 | 6 | 6292 |
| cellular macromolecule metabolic process | 4.5244E-3 | 8 | 2285 | 7 | 6292 |
| macromolecule metabolic process | 5.4192E-3 | 8 | 2349 | 7 | 6292 |
| cellular nitrogen compound metabolic process | 7.9712E-3 | 8 | 1770 | 6 | 6292 |
| nitrogen compound metabolic process | 8.4927E-3 | 8 | 1791 | 6 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| snoRNA binding | 6.4583E-4 | 8 | 31 | 2 | 6292 |
| rRNA (adenine-N6,N6-)-dimethyltransferase activity | 1.2715E-3 | 8 | 1 | 1 | 6292 |
| rRNA (adenine) methyltransferase activity | 1.2715E-3 | 8 | 1 | 1 | 6292 |
| rRNA methyltransferase activity | 6.3431E-3 | 8 | 5 | 1 | 6292 |