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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.505398594403]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

presequence translocase-associated import motor 1.0611E-6 2 7 2 6292
mitochondrial inner membrane presequence translocase complex 2.779E-6 2 11 2 6292
mitochondrial membrane part 2.5011E-4 2 100 2 6292
mitochondrial inner membrane 7.6048E-4 2 174 2 6292
mitochondrial matrix 7.7811E-4 2 176 2 6292
mitochondrial lumen 7.7811E-4 2 176 2 6292
organelle inner membrane 8.5997E-4 2 185 2 6292
mitochondrial membrane 1.7808E-3 2 266 2 6292
mitochondrial envelope 2.4514E-3 2 312 2 6292
mitochondrial part 5.6881E-3 2 475 2 6292
envelope 6.43E-3 2 505 2 6292
organelle envelope 6.43E-3 2 505 2 6292
nucleoid 8.248E-3 2 26 1 6292
mitochondrial nucleoid 8.248E-3 2 26 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein import into mitochondrial matrix 1.2783E-5 2 23 2 6292
intracellular protein transmembrane transport 4.3504E-5 2 42 2 6292
protein localization in mitochondrion 6.9626E-5 2 53 2 6292
protein targeting to mitochondrion 6.9626E-5 2 53 2 6292
mitochondrial transport 1.0838E-4 2 66 2 6292
transmembrane transport 1.7194E-4 2 83 2 6292
protein import 2.9194E-4 2 108 2 6292
protein localization in organelle 5.5711E-4 2 149 2 6292
mitochondrion organization 6.1087E-4 2 156 2 6292
protein targeting 1.3892E-3 2 235 2 6292
intracellular protein transport 1.6363E-3 2 255 2 6292
protein transport 1.8213E-3 2 269 2 6292
establishment of protein localization 1.8485E-3 2 271 2 6292
cellular protein localization 1.8898E-3 2 274 2 6292
cellular macromolecule localization 2.0305E-3 2 284 2 6292
protein localization 2.3118E-3 2 303 2 6292
protein refolding 3.1764E-3 2 10 1 6292
macromolecule localization 3.9717E-3 2 397 2 6292
intracellular transport 7.7118E-3 2 553 2 6292
establishment of localization in cell 9.0494E-3 2 599 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle