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Protein Overview: MTR3

Protein Complex Data

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen LSM8 MTR3 2 Uetz P, et al. (2000)
View Screen LSM2 MTR3 2 Uetz P, et al. (2000)

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data MTR3 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..44]
[194..250]
PSI-BLAST 51.522879 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3; S1 RNA-binding domain of polyribonucleotide phosphorylase, PNPase; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 1 and 4; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 6; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5
2 View Details [45..193] PSI-BLAST 51.522879 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3; S1 RNA-binding domain of polyribonucleotide phosphorylase, PNPase; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 1 and 4; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 6; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • exoribonuclease activity
  • 7.55877202113513 bayes_pls_golite062009
  • ribonuclease activity
  • 7.54644729272203 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
  • 7.5310318714913 bayes_pls_golite062009
  • 3'-5'-exoribonuclease activity
  • 6.46930372693262 bayes_pls_golite062009
  • 3'-5' exonuclease activity
  • 4.29895100594643 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
  • 3.83939403332553 bayes_pls_golite062009
  • exonuclease activity
  • 3.40686901061667 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
  • 2.86434572018929 bayes_pls_golite062009
  • RNA binding
  • 2.05527376734941 bayes_pls_golite062009
  • structural constituent of ribosome
  • 1.90115575554186 bayes_pls_golite062009
  • structural molecule activity
  • 1.69321127364043 bayes_pls_golite062009
  • hydrolase activity
  • 1.55476709794855 bayes_pls_golite062009
  • transcription regulator activity
  • 1.20748032530392 bayes_pls_golite062009
  • mRNA binding
  • 1.17402119891853 bayes_pls_golite062009
  • nucleic acid binding
  • 1.05662964529454 bayes_pls_golite062009
  • binding
  • 0.907487229190259 bayes_pls_golite062009
  • catalytic activity
  • 0.878454819018611 bayes_pls_golite062009
  • DNA binding
  • 0.828609700556836 bayes_pls_golite062009
  • nuclease activity
  • 0.69721312877891 bayes_pls_golite062009
  • tRNA-specific ribonuclease activity
  • 0.383567539949931 bayes_pls_golite062009
    2 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle