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Protein Overview: LCB2

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data LCB2 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..99] deduced N/A No confident structure predictions are available.
2 View Details [100..163]
[428..561]
PSI-BLAST 499.325697 2-amino-3-ketobutyrate CoA ligase
3 View Details [164..427] PSI-BLAST 499.325697 2-amino-3-ketobutyrate CoA ligase

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • C-palmitoyltransferase activity
  • 9.1839236553858 bayes_pls_golite062009
  • serine C-palmitoyltransferase activity
  • 9.1839236553858 bayes_pls_golite062009
  • C-acyltransferase activity
  • 4.29379571948906 bayes_pls_golite062009
  • 5-aminolevulinate synthase activity
  • 3.15163480353521 bayes_pls_golite062009
  • L-aspartate:2-oxoglutarate aminotransferase activity
  • 2.82458180884712 bayes_pls_golite062009
  • catalytic activity
  • 2.29878871754893 bayes_pls_golite062009
  • N-succinyltransferase activity
  • 1.81799375593294 bayes_pls_golite062009
  • threonine aldolase activity
  • 1.80396420390785 bayes_pls_golite062009
  • adenosylmethionine-8-amino-7-oxononanoate transaminase activity
  • 1.74778109525713 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
  • 1.46601963907552 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
  • 1.46601963907552 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
  • 1.28316822767388 bayes_pls_golite062009
  • transaminase activity
  • 1.24990480711889 bayes_pls_golite062009
  • transcription regulator activity
  • 1.07873942461292 bayes_pls_golite062009
  • glycine C-acetyltransferase activity
  • 0.935794708043259 bayes_pls_golite062009
  • DNA binding
  • 0.886628214497634 bayes_pls_golite062009
  • nucleic acid binding
  • 0.814403324199462 bayes_pls_golite062009
  • structural molecule activity
  • 0.811208803619077 bayes_pls_golite062009
  • transferase activity
  • 0.737426388870721 bayes_pls_golite062009
  • carbon-sulfur lyase activity
  • 0.698312655247044 bayes_pls_golite062009
  • binding
  • 0.661198018681765 bayes_pls_golite062009
  • intramolecular transferase activity, transferring amino groups
  • 0.659071155545801 bayes_pls_golite062009
  • transcription factor activity
  • 0.615294010373048 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
  • 0.319452731970428 bayes_pls_golite062009
  • cystathionine beta-lyase activity
  • 0.15938456446406 bayes_pls_golite062009
  • sulfurtransferase activity
  • 0.0450490929307473 bayes_pls_golite062009
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.48

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle