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Protein Overview: SCJ1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run VAM3 Sample: HX12 - trans-SNARE complex formation and fusion are inhibited (control). Hao Xu, et al. (2010)

Yeast Two-Hybrid Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data SCJ1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..122] PSI-BLAST 26.221849 DnaJ chaperone, N-terminal (J) domain
2 View Details [123..377] PSI-BLAST 47.39794 The crystal structure of Hsp40 Ydj1

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • unfolded protein binding
  • 3.04403163860617 bayes_pls_golite062009
  • chaperone binding
  • 2.86745334638583 bayes_pls_golite062009
  • binding
  • 2.63138872417193 bayes_pls_golite062009
  • heat shock protein binding
  • 2.17994194200939 bayes_pls_golite062009
  • transcription regulator activity
  • 1.91297632253219 bayes_pls_golite062009
  • nucleic acid binding
  • 1.6342534817623 bayes_pls_golite062009
  • protein binding
  • 1.60937254813642 bayes_pls_golite062009
  • DNA binding
  • 1.55234338199368 bayes_pls_golite062009
  • Hsp70 protein binding
  • 0.541755903922701 bayes_pls_golite062009
  • transferase activity
  • 0.240656521918556 bayes_pls_golite062009
  • catalytic activity
  • 0.106988907594358 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 0.0276971914937192 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
  • 2.7298921704023 bayes_pls_golite062009
  • protein disulfide isomerase activity
  • 2.4409950647303 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, transposing S-S bonds
  • 2.4409950647303 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, interconverting keto- and enol-groups
  • 2.23398279564144 bayes_pls_golite062009
  • unfolded protein binding
  • 2.04158808514315 bayes_pls_golite062009
  • protein binding
  • 1.57926302986794 bayes_pls_golite062009
  • receptor binding
  • 0.507762060964961 bayes_pls_golite062009
  • catalytic activity
  • 0.276917867171685 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle