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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCJ1
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPKLYIHLI LSLLLLPLIL AQDYYAILEI DKDATEKEIK SAYRQLSKKY HPDKNAGSEE  60
   61 AHQKFIEVGE AYDVLSDPEK KKIYDQFGAD AVKNGGGGGG PGGPGAGGFH DPFDIFERMF 120
  121 QGGHGGPGGG FGQRQRQRGP MIKVQEKLSL KQFYSGSSIE FTLNLNDECD ACHGSGSADG 180
  181 KLAQCPDCQG RGVIIQVLRM GIMTQQIQQM CGRCGGTGQI IKNECKTCHG KKVTKKNKFF 240
  241 HVDVPPGAPR NYMDTRVGEA EKGPDFDAGD LVIEFKEKDT ENMGYRRRGD NLYRTEVLSA 300
  301 AEALYGGWQR TIEFLDENKP VKLSRPAHVV VSNGEVEVVK GFGMPKGSKG YGDLYIDYVV 360
  361 VMPKTFKSGQ NMLKDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle