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Protein Overview: SKI7

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data SKI7 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..70] deduced N/A No confident structure predictions are available.
2 View Details [71..260] MSA 5.516997 View MSA. No confident structure predictions are available.
3 View Details [261..293]
[337..516]
PSI-BLAST 1110.0 Elongation factor eEF-1alpha, domain 2; Elongation factor eEF-1alpha, C-terminal domain; Elongation factor eEF-1alpha, N-terminal (G) domain
4 View Details [294..336]
[517..638]
PSI-BLAST 1110.0 Elongation factor eEF-1alpha, domain 2; Elongation factor eEF-1alpha, C-terminal domain; Elongation factor eEF-1alpha, N-terminal (G) domain
5 View Details [639..747] PSI-BLAST 1110.0 Elongation factor eEF-1alpha, domain 2; Elongation factor eEF-1alpha, C-terminal domain; Elongation factor eEF-1alpha, N-terminal (G) domain

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3
Term Confidence Notes
  • ribonuclease activity
  • 4.3040603813219 bayes_pls_golite062009
  • hydrolase activity
  • 2.55157966585974 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
  • 1.44266227866728 bayes_pls_golite062009
  • binding
  • 1.41264401383678 bayes_pls_golite062009
  • exonuclease activity
  • 1.15670533472751 bayes_pls_golite062009
  • nuclease activity
  • 1.06224744208356 bayes_pls_golite062009
  • catalytic activity
  • 1.00104173493322 bayes_pls_golite062009
  • structural constituent of ribosome
  • 0.860102064846772 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
  • 0.759324158861044 bayes_pls_golite062009
  • RNA binding
  • 0.707596564331465 bayes_pls_golite062009
  • nucleic acid binding
  • 0.625617128641089 bayes_pls_golite062009
  • purine nucleotide binding
  • 0.569910969126728 bayes_pls_golite062009
  • purine ribonucleotide binding
  • 0.568840867400671 bayes_pls_golite062009
  • ribonucleotide binding
  • 0.568779924702229 bayes_pls_golite062009
  • nucleotide binding
  • 0.564275755355315 bayes_pls_golite062009
  • 0.40076293158639 bayes_pls_golite062009
  • translation regulator activity
  • 0.29096092258568 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 0.274994961137851 bayes_pls_golite062009
  • translation termination factor activity
  • 0.269303802954244 bayes_pls_golite062009
  • translation release factor activity
  • 0.252222008028593 bayes_pls_golite062009
  • ATP binding
  • 0.1860481660648 bayes_pls_golite062009
  • adenyl ribonucleotide binding
  • 0.152859582615242 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.147579541298736 bayes_pls_golite062009
  • adenyl nucleotide binding
  • 0.138615225841109 bayes_pls_golite062009
  • pyrophosphatase activity
  • 0.133017653323467 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 0.113504049290503 bayes_pls_golite062009
  • structural molecule activity
  • 0.11239762372728 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 0.111293884322157 bayes_pls_golite062009
  • DNA binding
  • 0.0064778111446141 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle