| From Publication: | Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22. |
| Notes: | From the published set of protein complexes (core proteins only) |
| Complex Size: | 3 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| epsilon DNA polymerase complex | 2.4099E-10 | 3 | 5 | 3 | 6292 |
| DNA polymerase complex | 2.8918E-9 | 3 | 10 | 3 | 6292 |
| nuclear replisome | 1.9664E-8 | 3 | 18 | 3 | 6292 |
| replisome | 1.9664E-8 | 3 | 18 | 3 | 6292 |
| nuclear replication fork | 2.7472E-8 | 3 | 20 | 3 | 6292 |
| nucleotide-excision repair complex | 3.2051E-8 | 3 | 21 | 3 | 6292 |
| replication fork | 2.7665E-7 | 3 | 42 | 3 | 6292 |
| protein-DNA complex | 7.0513E-7 | 3 | 57 | 3 | 6292 |
| nuclear chromosome part | 2.7115E-5 | 3 | 190 | 3 | 6292 |
| nuclear chromosome | 4.698E-5 | 3 | 228 | 3 | 6292 |
| chromosomal part | 5.2792E-5 | 3 | 237 | 3 | 6292 |
| chromosome | 8.1719E-5 | 3 | 274 | 3 | 6292 |
| chromatin accessibility complex | 1.9063E-3 | 3 | 4 | 1 | 6292 |
| non-membrane-bounded organelle | 3.5313E-3 | 3 | 959 | 3 | 6292 |
| intracellular non-membrane-bounded organelle | 3.5313E-3 | 3 | 959 | 3 | 6292 |
| nuclear part | 5.3751E-3 | 3 | 1103 | 3 | 6292 |
| protein complex | 5.8881E-3 | 3 | 1137 | 3 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| double-stranded DNA binding | 4.2679E-8 | 3 | 23 | 3 | 6292 |
| structure-specific DNA binding | 3.1916E-7 | 3 | 44 | 3 | 6292 |
| DNA-directed DNA polymerase activity | 5.201E-6 | 3 | 110 | 3 | 6292 |
| DNA polymerase activity | 5.9501E-6 | 3 | 115 | 3 | 6292 |
| nucleotidyltransferase activity | 1.8706E-5 | 3 | 168 | 3 | 6292 |
| DNA binding | 6.6597E-5 | 3 | 256 | 3 | 6292 |
| transferase activity, transferring phosphorus-containing groups | 2.9545E-4 | 3 | 420 | 3 | 6292 |
| nucleic acid binding | 1.1811E-3 | 3 | 666 | 3 | 6292 |
| transferase activity | 2.0257E-3 | 3 | 797 | 3 | 6292 |
| zinc ion binding | 3.8101E-3 | 3 | 8 | 1 | 6292 |
| binding | 8.6823E-3 | 3 | 1294 | 3 | 6292 |