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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 8 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Ino80 complex 3.4176E-20 8 11 7 6292
DNA helicase complex 3.4176E-20 8 11 7 6292
nuclear chromatin 1.6728E-13 8 73 7 6292
chromatin 2.4676E-13 8 77 7 6292
chromatin remodeling complex 1.5229E-12 8 99 7 6292
nuclear chromosome part 1.6015E-10 8 190 7 6292
nuclear chromosome 5.8157E-10 8 228 7 6292
chromosomal part 7.6434E-10 8 237 7 6292
chromosome 2.1246E-9 8 274 7 6292
non-membrane-bounded organelle 1.3016E-5 8 959 7 6292
intracellular non-membrane-bounded organelle 1.3016E-5 8 959 7 6292
nuclear part 3.3951E-5 8 1103 7 6292
protein complex 4.178E-5 8 1137 7 6292
nucleus 1.2145E-4 8 2041 8 6292
macromolecular complex 4.9027E-4 8 1635 7 6292
histone acetyltransferase complex 1.303E-3 8 44 2 6292
transcription factor TFIIF complex 3.8101E-3 8 3 1 6292
organelle part 4.4856E-3 8 2282 7 6292
intracellular organelle part 4.4856E-3 8 2282 7 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

chromatin remodeling 3.5047E-11 8 68 6 6292
chromatin modification 8.8861E-9 8 168 6 6292
chromatin organization 2.7823E-8 8 203 6 6292
chromosome organization 1.1013E-5 8 555 6 6292
organelle organization 6.5677E-4 8 1127 6 6292
cellular component organization 4.336E-3 8 1582 6 6292
transcription from RNA polymerase II promoter 6.8551E-3 8 335 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ATP-dependent 5'-3' DNA helicase activity 4.7121E-8 8 7 3 6292
5'-3' DNA helicase activity 7.5348E-8 8 8 3 6292
ATP-dependent DNA helicase activity 1.0914E-6 8 18 3 6292
DNA helicase activity 7.9274E-6 8 34 3 6292
ATP-dependent helicase activity 2.2722E-5 8 48 3 6292
purine NTP-dependent helicase activity 2.2722E-5 8 48 3 6292
DNA-dependent ATPase activity 3.4321E-5 8 55 3 6292
helicase activity 1.182E-4 8 83 3 6292
ATPase activity, coupled 6.6794E-4 8 149 3 6292
ATPase activity 1.8378E-3 8 211 3 6292
nucleoside-triphosphatase activity 6.5162E-3 8 329 3 6292
hydrolase activity, acting on acid anhydrides 7.936E-3 8 353 3 6292
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 7.936E-3 8 353 3 6292
pyrophosphatase activity 7.936E-3 8 353 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle