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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 10 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleolus 1.4588E-15 10 211 10 6292
nuclear lumen 3.41E-12 10 453 10 6292
organelle lumen 1.5167E-10 10 660 10 6292
intracellular organelle lumen 1.5167E-10 10 660 10 6292
membrane-enclosed lumen 2.7426E-10 10 700 10 6292
non-membrane-bounded organelle 6.5007E-9 10 959 10 6292
intracellular non-membrane-bounded organelle 6.5007E-9 10 959 10 6292
nuclear part 2.6498E-8 10 1103 10 6292
nucleus 1.2708E-5 10 2041 10 6292
organelle part 3.8887E-5 10 2282 10 6292
intracellular organelle part 3.8887E-5 10 2282 10 6292
nuclear envelope 1.7555E-4 10 199 4 6292
nuclear outer membrane 2.7608E-4 10 86 3 6292
nuclear membrane 3.9408E-4 10 97 3 6292
outer membrane 2.3071E-3 10 178 3 6292
organelle outer membrane 2.3071E-3 10 178 3 6292
endomembrane system 2.4387E-3 10 398 4 6292
nuclear membrane-endoplasmic reticulum network 4.8992E-3 10 232 3 6292
envelope 5.822E-3 10 505 4 6292
organelle envelope 5.822E-3 10 505 4 6292
membrane-bounded organelle 5.9511E-3 10 3771 10 6292
intracellular membrane-bounded organelle 5.9511E-3 10 3771 10 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribosome biogenesis 2.2334E-13 10 346 10 6292
ribonucleoprotein complex biogenesis 4.9117E-13 10 374 10 6292
cellular component biogenesis 2.5149E-10 10 694 10 6292
ribosomal large subunit biogenesis 2.4376E-8 10 65 5 6292
ribosomal large subunit assembly 3.1687E-7 10 41 4 6292
rRNA processing 7.485E-7 10 128 5 6292
rRNA metabolic process 1.0505E-6 10 137 5 6292
ribosomal subunit assembly 1.0557E-6 10 55 4 6292
ribosome assembly 1.9533E-6 10 64 4 6292
organelle assembly 2.6475E-6 10 69 4 6292
ribonucleoprotein complex assembly 8.4067E-6 10 92 4 6292
ncRNA processing 9.745E-6 10 215 5 6292
ncRNA metabolic process 2.329E-5 10 257 5 6292
cellular macromolecular complex assembly 1.2411E-4 10 182 4 6292
RNA processing 1.5318E-4 10 380 5 6292
cellular macromolecular complex subunit organization 4.8407E-4 10 259 4 6292
macromolecular complex assembly 6.6045E-4 10 281 4 6292
macromolecular complex subunit organization 1.628E-3 10 357 4 6292
cellular component assembly 2.1564E-3 10 385 4 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ATP-dependent RNA helicase activity 6.4706E-8 10 28 4 6292
RNA-dependent ATPase activity 7.5002E-8 10 29 4 6292
RNA helicase activity 3.4995E-7 10 42 4 6292
ATP-dependent helicase activity 6.0557E-7 10 48 4 6292
purine NTP-dependent helicase activity 6.0557E-7 10 48 4 6292
nucleoside-triphosphatase activity 3.4327E-6 10 329 6 6292
hydrolase activity, acting on acid anhydrides 5.1824E-6 10 353 6 6292
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 5.1824E-6 10 353 6 6292
pyrophosphatase activity 5.1824E-6 10 353 6 6292
helicase activity 5.5673E-6 10 83 4 6292
ATPase activity 8.8878E-6 10 211 5 6292
ATPase activity, coupled 5.6775E-5 10 149 4 6292
hydrolase activity 1.129E-3 10 911 6 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle