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Protein Overview: gi|15027997, gi|...

General Information:
Name(s) found: gi|9757862 [NCBI NR]
gi|4102703 [NCBI NR]
gi|30697525 [NCBI NR]
gi|20259209 [NCBI NR]
gi|15240250 [NCBI NR]
gi|15027997 [NCBI NR]
Description(s) found:
Found 16 descriptions.
SHOW ALL
  • gi|9757862|dbj|BAB08496.1| ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana] [NCBI NR]
  • gi|4102703|gb|AAD09954.1| ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana] [NCBI NR]
  • gi|30697525|ref|NP_851240.1| RPE; catalytic/ ribulose-phosphate 3-epimerase [Arabidopsis thaliana] [NCBI NR]
  • gi|20259209|gb|AAM14320.1| putative ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana] [NCBI NR]
  • gi|15240250|ref|NP_200949.1| RPE; catalytic/ ribulose-phosphate 3-epimerase [Arabidopsis thaliana] [NCBI NR]
  • gi|15027997|gb|AAK76529.1| putative ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 281 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    apoplast [IDA]
    stromule [IDA]
    chloroplast envelope [IDA]
    thylakoid [IDA]
    Biological Process: carbohydrate metabolic process [ISS]
    response to cold [IEP]
    embryonic development ending in seed dormancy [NAS]
    response to nematode [IMP]
    Molecular Function: catalytic activity [IEA]
    ribulose-phosphate 3-epimerase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSAASLCC SSTQVNGFGL RPERSLLYQP TSFSFSRRRT HGIVKASSRV DRFSKSDIIV  60
   61 SPSILSANFA KLGEQVKAVE LAGCDWIHVD VMDGRFVPNI TIGPLVVDAL RPVTDLPLDV 120
  121 HLMIVEPEQR VPDFIKAGAD IVSVHCEQQS TIHLHRTVNQ IKSLGAKAGV VLNPGTPLSA 180
  181 IEYVLDMVDL VLIMSVNPGF GGQSFIESQV KKISDLRKMC AEKGVNPWIE VDGGVTPANA 240
  241 YKVIEAGANA LVAGSAVFGA KDYAEAIKGI KASKRPAAVA V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..281] PSI-BLAST 50.69897 D-ribulose-5-phosphate 3-epimerase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ribulose-phosphate 3-epimerase activity
    		•  8.10992708106581 bayes_pls_golite062009
  • catalytic activity
    		•  2.44231061702877 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  1.86158562896415 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, interconverting aldoses and ketoses
    		•  1.36492964250879 bayes_pls_golite062009
  • isomerase activity
    		•  0.935800409577999 bayes_pls_golite062009
  • racemase and epimerase activity, acting on carbohydrates and derivatives
    		•  0.764608070506109 bayes_pls_golite062009
  • orotidine-5'-phosphate decarboxylase activity
    		•  0.758594564254247 bayes_pls_golite062009
  • binding
    		•  0.595171555788202 bayes_pls_golite062009
  • racemase and epimerase activity
    		•  0.288948763149344 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  0.1100847613283 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle