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View Structure Prediction Details

Protein: gi|15027997, gi|...
Organism: Arabidopsis thaliana
Length: 281 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15027997, gi|....

Description E-value Query
Range
Subject
Range
RPE_SOLTU - Ribulose-phosphate 3-epimerase, chloroplastic (Fragment) OS=Solanum tuberosum PE=1 SV=1
221.0 [0..20] [281..19]

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Predicted Domain #1
Region A:
Residues: [1-281]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSAASLCC SSTQVNGFGL RPERSLLYQP TSFSFSRRRT HGIVKASSRV DRFSKSDIIV  60
   61 SPSILSANFA KLGEQVKAVE LAGCDWIHVD VMDGRFVPNI TIGPLVVDAL RPVTDLPLDV 120
  121 HLMIVEPEQR VPDFIKAGAD IVSVHCEQQS TIHLHRTVNQ IKSLGAKAGV VLNPGTPLSA 180
  181 IEYVLDMVDL VLIMSVNPGF GGQSFIESQV KKISDLRKMC AEKGVNPWIE VDGGVTPANA 240
  241 YKVIEAGANA LVAGSAVFGA KDYAEAIKGI KASKRPAAVA V

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.69897
Match: 1rpxA
Description: D-ribulose-5-phosphate 3-epimerase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ribulose-phosphate 3-epimerase activity 8.10992708106581 bayes_pls_golite062009
catalytic activity 2.44231061702877 bayes_pls_golite062009
intramolecular oxidoreductase activity 1.86158562896415 bayes_pls_golite062009
intramolecular oxidoreductase activity, interconverting aldoses and ketoses 1.36492964250879 bayes_pls_golite062009
isomerase activity 0.935800409577999 bayes_pls_golite062009
racemase and epimerase activity, acting on carbohydrates and derivatives 0.764608070506109 bayes_pls_golite062009
orotidine-5'-phosphate decarboxylase activity 0.758594564254247 bayes_pls_golite062009
binding 0.595171555788202 bayes_pls_golite062009
racemase and epimerase activity 0.288948763149344 bayes_pls_golite062009
carboxy-lyase activity 0.1100847613283 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle