YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SAG12_ARATH

General Information:
Name(s) found: SAG12_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
SHOW ALL
  • Senescence-specific cysteine protease SAG12 OS=Arabidopsis thaliana GN=SAG12 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 346 amino acids

    Gene Ontology:
    Cellular Component: senescence associated vacuole [IDA]
    Biological Process: defense response to fungus, incompatible interaction [IEP]
    leaf senescence [TAS]
    proteolysis [ISS]
    aging [IEP][TAS]
    response to ethylene stimulus [IEP]
    Molecular Function: cysteine-type peptidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKHMQIFL FVAIFSSFCF SITLSRPLDN ELIMQKRHIE WMTKHGRVYA DVKEENNRYV  60
   61 VFKNNVERIE HLNSIPAGRT FKLAVNQFAD LTNDEFRSMY TGFKGVSALS SQSQTKMSPF 120
  121 RYQNVSSGAL PVSVDWRKKG AVTPIKNQGS CGCCWAFSAV AAIEGATQIK KGKLISLSEQ 180
  181 QLVDCDTNDF GCEGGLMDTA FEHIKATGGL TTESNYPYKG EDATCNSKKT NPKATSITGY 240
  241 EDVPVNDEQA LMKAVAHQPV SVGIEGGGFD FQFYSSGVFT GECTTYLDHA VTAIGYGEST 300
  301 NGSKYWIIKN SWGTKWGESG YMRIQKDVKD KQGLCGLAMK ASYPTI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..115] FFAS03 3.2 Caricain (protease omega)
    2 View Details [116..346] PSI-BLAST 72.0 The 2.0 A crystal structure of the KDEL-tailed cysteine endopeptidase functioning in programmed cell death of Ricinus communis endosperm

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • peptidase activity
    		•  4.90619850296986 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  4.64381885397949 bayes_pls_golite062009
  • endopeptidase activity
    		•  3.75054525912786 bayes_pls_golite062009
  • hydrolase activity
    		•  3.74079711298952 bayes_pls_golite062009
  • cysteine-type peptidase activity
    		•  2.71117522993364 bayes_pls_golite062009
  • cysteine-type endopeptidase activity
    		•  1.95802900199539 bayes_pls_golite062009
  • binding
    		•  1.29265216891074 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  1.12653729823589 bayes_pls_golite062009
  • catalytic activity
    		•  1.05972260874031 bayes_pls_golite062009
  • protein binding
    		•  0.774177093888744 bayes_pls_golite062009
  • small conjugating protein-specific protease activity
    		•  0.649171767629235 bayes_pls_golite062009
  • thiolester hydrolase activity
    		•  0.59115205419466 bayes_pls_golite062009
  • kininogen binding
    		•  0.41283715939055 bayes_pls_golite062009
  • signal transducer activity
    		•  0.12644030784065 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.12644030784065 bayes_pls_golite062009
  • structural molecule activity
    		•  0.102555314244558 bayes_pls_golite062009
  • tubulin binding
    		•  0.0482209771629902 bayes_pls_golite062009
  • ubiquitin-specific protease activity
    		•  0.0101379718864654 bayes_pls_golite062009
  • microtubule binding
    		•  0.00635493133568055 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle