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Protein Overview: ARI10_ARATH

General Information:
Name(s) found: ARI10_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • Probable E3 ubiquitin-protein ligase ARI10 OS=Arabidopsis thaliana GN=ARI10 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 514 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYSDDDMID NESGEENNSD GGGNESYNYN AAVDTIILSE KSYVIIKEEE ILKLQRDDIE  60
   61 RVSTILFLSQ VEAIVLLLHY HWCVSKLEDE WFTDEERIRK TVGILKEPVV DVNGTEVDIQ 120
  121 CGICFESYTR KEIASVSCGH PYCKTCWTGY ITTKIEDGPG CLRVKCPEPS CYAVVGQDMI 180
  181 DEVTEKKDKD KYYRYFLRSY VEDGKKMKWC PSPGCECAVE FGESSGYDVA CLCSYRFCWN 240
  241 CSEDAHSPVD CETVSKWIFK NQDESENKNW ILANSKPCPK CKRPIEKSHG CNHMTCSASC 300
  301 GHRFCWICGK SYSDHYACNN YVEDADHDKR TLLQSEIKRY THYYVRWVEN QSSRLKAMSD 360
  361 LEKFQSVQLK QLSDNQCKPK IDLQFIVDAW LQIIECRRVL KWTYAYGYYL DNLAKRPLFE 420
  421 YLQGEAETGL ERLHHCAENE LKQFFIKSED PSDTFNAFRM KLTGLTKVTK TYFDNLVKAL 480
  481 ENGLADVTKS SEESADFLET QKLYDAYISE GCFF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..102] deduced N/A No confident structure predictions are available.
    2 View Details [103..200] PSI-BLAST 6.39794 No description for 2cklB was found.
    3 View Details [201..260] FFAS03 2.61 Solution Structure of the IBR domain of the RING finger protein 31 protein
    4 View Details [261..322] PSI-BLAST 7.045757 Solution Structure of the C-terminal RING from a RING-IBR-RING (TRIAD) motif
    5 View Details [323..514] MSA 5.48499 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • ubiquitin-protein ligase activity
    		•  5.25982737281228 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  5.16068345159314 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  4.24782814163304 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  2.79292110382407 bayes_pls_golite062009
  • binding
    		•  2.70912934275371 bayes_pls_golite062009
  • protein binding
    		•  1.48593945455888 bayes_pls_golite062009
  • small conjugating protein-specific protease activity
    		•  1.02238152139385 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.911827807813353 bayes_pls_golite062009
  • ubiquitin-specific protease activity
    		•  0.821040441472875 bayes_pls_golite062009
  • transcription factor binding
    		•  0.769719546176331 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.69956438716198 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.451160479135532 bayes_pls_golite062009
  • ligase activity
    		•  0.424146907469434 bayes_pls_golite062009
  • DNA binding
    		•  0.369510087469936 bayes_pls_golite062009
  • cysteine-type peptidase activity
    		•  0.356312424125648 bayes_pls_golite062009
  • hydrolase activity
    		•  0.185228576891116 bayes_pls_golite062009
  • catalytic activity
    		•  0.168711389690753 bayes_pls_golite062009
  • peptidase activity
    		•  0.107857202210184 bayes_pls_golite062009
  • ubiquitin thiolesterase activity
    		•  0.0136579100966835 bayes_pls_golite062009
    4
    Term Confidence Notes
  • ubiquitin-protein ligase activity
    		•  5.65442784325159 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  5.55686022186257 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  4.59153177011595 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  3.07217714843839 bayes_pls_golite062009
  • binding
    		•  2.78710909602478 bayes_pls_golite062009
  • protein binding
    		•  1.5975811408548 bayes_pls_golite062009
  • small conjugating protein-specific protease activity
    		•  1.2126425713931 bayes_pls_golite062009
  • ubiquitin-specific protease activity
    		•  1.03469202541773 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.943706743211193 bayes_pls_golite062009
  • transcription factor binding
    		•  0.90065892745057 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.708499177773075 bayes_pls_golite062009
  • ligase activity
    		•  0.63517530468004 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.517687629465752 bayes_pls_golite062009
  • cysteine-type peptidase activity
    		•  0.50197530717959 bayes_pls_golite062009
  • DNA binding
    		•  0.365874679056682 bayes_pls_golite062009
  • ubiquitin thiolesterase activity
    		•  0.265769062717221 bayes_pls_golite062009
  • hydrolase activity
    		•  0.156835837705934 bayes_pls_golite062009
  • catalytic activity
    		•  0.14112008370434 bayes_pls_golite062009
  • peptidase activity
    		•  0.121357659741468 bayes_pls_golite062009
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle