| Protein: | ARI10_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 514 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARI10_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
420.0 | [0..1] | [514..1] |
|
Region A: Residues: [1-102] |
1 11 21 31 41 51
| | | | | |
1 MDYSDDDMID NESGEENNSD GGGNESYNYN AAVDTIILSE KSYVIIKEEE ILKLQRDDIE 60
61 RVSTILFLSQ VEAIVLLLHY HWCVSKLEDE WFTDEERIRK TV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [103-200] |
1 11 21 31 41 51
| | | | | |
1 GILKEPVVDV NGTEVDIQCG ICFESYTRKE IASVSCGHPY CKTCWTGYIT TKIEDGPGCL 60
61 RVKCPEPSCY AVVGQDMIDE VTEKKDKDKY YRYFLRSY
|
| Detection Method: | |
| Confidence: | 6.39794 |
| Match: | 2cklB |
| Description: | No description for 2cklB was found. |
|
Region A: Residues: [201-260] |
1 11 21 31 41 51
| | | | | |
1 VEDGKKMKWC PSPGCECAVE FGESSGYDVA CLCSYRFCWN CSEDAHSPVD CETVSKWIFK 60
61
|
| Detection Method: | |
| Confidence: | 2.61 |
| Match: | 2ct7A |
| Description: | Solution Structure of the IBR domain of the RING finger protein 31 protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 5.25982737281228 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 5.16068345159314 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 4.24782814163304 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 2.79292110382407 | bayes_pls_golite062009 |
| binding | 2.70912934275371 | bayes_pls_golite062009 |
| protein binding | 1.48593945455888 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 1.02238152139385 | bayes_pls_golite062009 |
| transcription regulator activity | 0.911827807813353 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 0.821040441472875 | bayes_pls_golite062009 |
| transcription factor binding | 0.769719546176331 | bayes_pls_golite062009 |
| nucleic acid binding | 0.69956438716198 | bayes_pls_golite062009 |
| transcription repressor activity | 0.451160479135532 | bayes_pls_golite062009 |
| ligase activity | 0.424146907469434 | bayes_pls_golite062009 |
| DNA binding | 0.369510087469936 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 0.356312424125648 | bayes_pls_golite062009 |
| hydrolase activity | 0.185228576891116 | bayes_pls_golite062009 |
| catalytic activity | 0.168711389690753 | bayes_pls_golite062009 |
| peptidase activity | 0.107857202210184 | bayes_pls_golite062009 |
| ubiquitin thiolesterase activity | 0.0136579100966835 | bayes_pls_golite062009 |
|
Region A: Residues: [261-322] |
1 11 21 31 41 51
| | | | | |
1 NQDESENKNW ILANSKPCPK CKRPIEKSHG CNHMTCSASC GHRFCWICGK SYSDHYACNN 60
61 YV
|
| Detection Method: | |
| Confidence: | 7.045757 |
| Match: | 1wd2A |
| Description: | Solution Structure of the C-terminal RING from a RING-IBR-RING (TRIAD) motif |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 5.65442784325159 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 5.55686022186257 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 4.59153177011595 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 3.07217714843839 | bayes_pls_golite062009 |
| binding | 2.78710909602478 | bayes_pls_golite062009 |
| protein binding | 1.5975811408548 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 1.2126425713931 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 1.03469202541773 | bayes_pls_golite062009 |
| transcription regulator activity | 0.943706743211193 | bayes_pls_golite062009 |
| transcription factor binding | 0.90065892745057 | bayes_pls_golite062009 |
| nucleic acid binding | 0.708499177773075 | bayes_pls_golite062009 |
| ligase activity | 0.63517530468004 | bayes_pls_golite062009 |
| transcription repressor activity | 0.517687629465752 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 0.50197530717959 | bayes_pls_golite062009 |
| DNA binding | 0.365874679056682 | bayes_pls_golite062009 |
| ubiquitin thiolesterase activity | 0.265769062717221 | bayes_pls_golite062009 |
| hydrolase activity | 0.156835837705934 | bayes_pls_golite062009 |
| catalytic activity | 0.14112008370434 | bayes_pls_golite062009 |
| peptidase activity | 0.121357659741468 | bayes_pls_golite062009 |
|
Region A: Residues: [323-514] |
1 11 21 31 41 51
| | | | | |
1 EDADHDKRTL LQSEIKRYTH YYVRWVENQS SRLKAMSDLE KFQSVQLKQL SDNQCKPKID 60
61 LQFIVDAWLQ IIECRRVLKW TYAYGYYLDN LAKRPLFEYL QGEAETGLER LHHCAENELK 120
121 QFFIKSEDPS DTFNAFRMKL TGLTKVTKTY FDNLVKALEN GLADVTKSSE ESADFLETQK 180
181 LYDAYISEGC FF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
