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Protein Overview: gi|15234324, gi|...

General Information:
Name(s) found: gi|7488376 [NCBI NR]
gi|7270567 [NCBI NR]
gi|2961374 [NCBI NR]
gi|15234324 [NCBI NR]
Description(s) found:
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  • pir||T04584 TMV resistance protein N homolog F23E13.40 - Arabidopsis thaliana [NCBI NR]
  • gi|7270567|emb|CAB81524.1| putative disease resistance protein [Arabidopsis thaliana] [NCBI NR]
  • gi|2961374|emb|CAA18121.1| putative disease resistance protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15234324|ref|NP_195338.1| disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] [NCBI NR]
  • (O65507) Putative disease resistance protein [athaliana3702.FASTAC.txt]
  • putative disease resistance protein [Arabidopsis thaliana]gi|2961374|emb|CAA18121.1| putative disease resistance protein [Arabidopsis thaliana]gi|7488376|pir||T04584 TMV resistance protein N homolog F23E13.40 - Arabidopsis thalianagi|15234324|ref|NP_19 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Disease resistance protein (TIR-NBS-LRR class) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr4:17104779-17108714 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative disease resistance protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATP binding / transmembrane receptor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr4:17104776-17108711 FORWARD LENGTH=1179 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative disease resistance protein OS=Arabidopsis thaliana GN=F23E13.40 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 1179 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    apoptosis [IEA]
    defense response [ISS]
    Molecular Function: ATP binding [IEA]
    protein binding [IEA]
    transmembrane receptor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDYSSSSSS SVQLSPPQHQ VFLNFRGKQL RNGFVSHLEK ALRRDGINVF IDRNETKGRD  60
   61 LSNLFSRIQE SRIALAIFSS MYTESYWCLD ELVKIKDCVD LGTLVVIPIF YMVDTDDVKN 120
  121 LKGAFGYTFW KLAKTCNGEK LDKWKQALKD VPKKLGFTLS EMSDEGESIN QIVGEVIKVL 180
  181 SSDVMPDLER EIPIDDPFPT GEQVPEAAPD SPPPLFGIET RLKQLEEKLD FECKDTLTIG 240
  241 VVGMPGIGKT TLTSMLYEKW QHDFLRCVFL HDVRKMWKDC MMDRSIFIEE LLKDDNVNQE 300
  301 VADFSPESLK ALLLSKKSLV VLDNVSDKKQ IEVLLGESDW IKRGSRIFIT TSDRSVIEGM 360
  361 VDDTYEVLRL TGRDSFEYFS YFAFSGKLCP PVRTFMNLSR LFADYAKGNP LALKILGKEL 420
  421 NGKDKTHWEE KLSKLMQSPN KTIQDVLRVS YDELGLSHKD VFLDVACFFR SGDEYYVRCL 480
  481 VESCDTEAID TVSEIKDLAS KFLINISGGR VEMHDLLYTF GKELGSQGSR RLWNHKAVVG 540
  541 ALKNRVGAVR GIFLDMSELK KKLPLDRSTF IKMRNLRYLK FYSSRCDREC EADSKLNFPE 600
  601 GLEFPLDEIR YLYWLKFPLM KLPKDFNPKN LTDFNLPYSE IEELWEGAKD TQKLKWVDLS 660
  661 HSRKLCNLSG LLNAESLQRL NLEGCTSLEE LPREMKRMKS LIFLNMRGCT SLRVLPRMNL 720
  721 ISLKTLILTN CSSIQKFQVI SDNLETLHLD GTAIGKLPTD MVKLQKLIVL NLKDCKMLGA 780
  781 VPEFLGKLKA LQELVLSGCS KLKTFSVPIE TMKCLQILLL DGTALKEMPK LLRFNSSRVE 840
  841 DLPELRRGIN GLSSLRRLCL SRNNMISNLQ IDINQLYHLK WLDLKYCKNL TSIPLLPPNL 900
  901 EILDAHGCEK LKTVASPMAL LKLMEQVQSK FIFTNCNNLE QVAKNSITSY AQRKSQLDAR 960
  961 RCYKEGGVSE ALFIACFPGS DVPSWFNYQT FGSALRLKLP PHWCDNRLST IALCAVVTFP1020
 1021 DTQDEINRFS IECTCEFKNE LGTCIRFSCT LGGSWIESRK IDSDHVFIGY TSSSHITKHL1080
 1081 EGSLKLKEHD KCVPTEASIE FEVIDGAGEI VNCGLSLVYE EPNHVVVERN CKGASSRRDM1140
 1141 SVGESILSIA AGYLSNVLRF LWLGVVFFMV YGFSKIFVK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..149] FFAS03 4.39 Toll-like receptor 1, TLR1
    2 View Details [150..616] PSI-BLAST 10.045757 Structure of the apoptotic protease-activating factor 1 bound to ADP
    3 View Details [617..1179] PSI-BLAST 27.0 The molecular structure of toll-like receptor 3 ligand binding domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.166909062418251 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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