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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15234324, gi|...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDYSSSSSS SVQLSPPQHQ VFLNFRGKQL RNGFVSHLEK ALRRDGINVF IDRNETKGRD  60
   61 LSNLFSRIQE SRIALAIFSS MYTESYWCLD ELVKIKDCVD LGTLVVIPIF YMVDTDDVKN 120
  121 LKGAFGYTFW KLAKTCNGEK LDKWKQALKD VPKKLGFTLS EMSDEGESIN QIVGEVIKVL 180
  181 SSDVMPDLER EIPIDDPFPT GEQVPEAAPD SPPPLFGIET RLKQLEEKLD FECKDTLTIG 240
  241 VVGMPGIGKT TLTSMLYEKW QHDFLRCVFL HDVRKMWKDC MMDRSIFIEE LLKDDNVNQE 300
  301 VADFSPESLK ALLLSKKSLV VLDNVSDKKQ IEVLLGESDW IKRGSRIFIT TSDRSVIEGM 360
  361 VDDTYEVLRL TGRDSFEYFS YFAFSGKLCP PVRTFMNLSR LFADYAKGNP LALKILGKEL 420
  421 NGKDKTHWEE KLSKLMQSPN KTIQDVLRVS YDELGLSHKD VFLDVACFFR SGDEYYVRCL 480
  481 VESCDTEAID TVSEIKDLAS KFLINISGGR VEMHDLLYTF GKELGSQGSR RLWNHKAVVG 540
  541 ALKNRVGAVR GIFLDMSELK KKLPLDRSTF IKMRNLRYLK FYSSRCDREC EADSKLNFPE 600
  601 GLEFPLDEIR YLYWLKFPLM KLPKDFNPKN LTDFNLPYSE IEELWEGAKD TQKLKWVDLS 660
  661 HSRKLCNLSG LLNAESLQRL NLEGCTSLEE LPREMKRMKS LIFLNMRGCT SLRVLPRMNL 720
  721 ISLKTLILTN CSSIQKFQVI SDNLETLHLD GTAIGKLPTD MVKLQKLIVL NLKDCKMLGA 780
  781 VPEFLGKLKA LQELVLSGCS KLKTFSVPIE TMKCLQILLL DGTALKEMPK LLRFNSSRVE 840
  841 DLPELRRGIN GLSSLRRLCL SRNNMISNLQ IDINQLYHLK WLDLKYCKNL TSIPLLPPNL 900
  901 EILDAHGCEK LKTVASPMAL LKLMEQVQSK FIFTNCNNLE QVAKNSITSY AQRKSQLDAR 960
  961 RCYKEGGVSE ALFIACFPGS DVPSWFNYQT FGSALRLKLP PHWCDNRLST IALCAVVTFP1020
 1021 DTQDEINRFS IECTCEFKNE LGTCIRFSCT LGGSWIESRK IDSDHVFIGY TSSSHITKHL1080
 1081 EGSLKLKEHD KCVPTEASIE FEVIDGAGEI VNCGLSLVYE EPNHVVVERN CKGASSRRDM1140
 1141 SVGESILSIA AGYLSNVLRF LWLGVVFFMV YGFSKIFVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle