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Protein Overview: gi|15223551, gi|...

General Information:
Name(s) found: gi|15223551 [NCBI NR]
gi|12323030 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|15223551|ref|NP_176044.1| disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] [NCBI NR]
  • gi|12323030|gb|AAG51507.1|AC058785_10 disease resistance protein, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 897 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    apoptosis [IEA]
    defense response [ISS]
    Molecular Function: nucleotide binding [IEA]
    ATP binding [IEA]
    transmembrane receptor activity [IEA]
    nucleoside-triphosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSSSPRN WRYNVFTSFH GPDVRIKFLS HLRQQFIYNG ITMFDDNGIE RSQIIAPALK  60
   61 KAIGESRIAI LLLSKNYASS SWSLDELLEI LKCKEDIGQI VMTVFYEVDP SDVRNQTGDF 120
  121 GIAFKETCAH KTEEERQKWT QALTYVGNIA GEDFKHWPNE AKMIEKIARD VSDILNVTPC 180
  181 RDFDGMVGLN DHLREMESLL DLKNDGVKIV GISGPAGIGK STIATALHGR LSNMFQRTCF 240
  241 VDNLRESYKI GLDEYRLKLH LQQQLLAYVL NQDKIRVGHL SVMKERLDDL RVLIILDDVE 300
  301 HLYQLEALAD IRWFGPGSRV IVTTENREIL LQHGIKDIYH VGFPSEGEAL MIFCLSAFRQ 360
  361 PSPPYGFLKL TYEVASICGN LPLGLHVLGT LLWGKSQADW IEELPRLKDC LDGRIESVLK 420
  421 VGYESLYEKD QALFLLIAVY FNYDYVDYVT SMLENTNVLD VRLGLKKLAN RCLIQIDIDH 480
  481 NRKSRVVMNR LLQVMAREVI SKQKISKRKI LEDPQDICYV LEEAKGKGSA LGLSLDVAEI 540
  541 KELVINKKAF KKMCNLLILK VFNGTDPRDS KLHVPEEMEL PSSIRLLHWE AYPRKSFRFG 600
  601 PENLVTLNME YSELEKLWKG TQPLANLKEM NLCGSSCLKE LPDLSKAANL ERLDVAECNA 660
  661 LVEIPSSVAN LHKIVNLHME SCESLEVIPT LINLASLKII NIHDCPRLKS FPDVPTSLEE 720
  721 LVIEKTGVQE LPASFRHCTG VTTLYICSNR NLKTFSTHLP MGLRKLDLSN CGIEWVTDSI 780
  781 KDLHNLYYLK LSGCKRLVSL PELPCSLECL FAEDCTSLER VSDSLNIPNA QFNFIKCFTL 840
  841 DREARRAIIQ QSFVHGNVIL PAREVLEEVD YRARGNCLTI PPSAFNRFKV CVVLSIH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..172] FFAS03 4.38 Toll-like receptor 1, TLR1
    2 View Details [173..363] PSI-BLAST 4.69897 Structure of the apoptotic protease-activating factor 1 bound to ADP
    3 View Details [364..817] PSI-BLAST 11.30103 No description for 2z64A was found.
    4 View Details [818..897] PSI-BLAST 20.30103 Leucine rich effector protein YopM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.166909062418251 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle