| Protein: | gi|15223551, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 897 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15223551, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
579.0 | [0..1] | [896..1] |
|
Region A: Residues: [1-172] |
1 11 21 31 41 51
| | | | | |
1 MASSSSSPRN WRYNVFTSFH GPDVRIKFLS HLRQQFIYNG ITMFDDNGIE RSQIIAPALK 60
61 KAIGESRIAI LLLSKNYASS SWSLDELLEI LKCKEDIGQI VMTVFYEVDP SDVRNQTGDF 120
121 GIAFKETCAH KTEEERQKWT QALTYVGNIA GEDFKHWPNE AKMIEKIARD VS
|
| Detection Method: |  |
| Confidence: | 4.38 |
| Match: | 1fyvA |
| Description: | Toll-like receptor 1, TLR1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.166909062418251 | bayes_pls_golite062009 |
|
Region A: Residues: [173-363] |
1 11 21 31 41 51
| | | | | |
1 DILNVTPCRD FDGMVGLNDH LREMESLLDL KNDGVKIVGI SGPAGIGKST IATALHGRLS 60
61 NMFQRTCFVD NLRESYKIGL DEYRLKLHLQ QQLLAYVLNQ DKIRVGHLSV MKERLDDLRV 120
121 LIILDDVEHL YQLEALADIR WFGPGSRVIV TTENREILLQ HGIKDIYHVG FPSEGEALMI 180
181 FCLSAFRQPS P
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 1z6tA |
| Description: | Structure of the apoptotic protease-activating factor 1 bound to ADP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [364-817] |
1 11 21 31 41 51
| | | | | |
1 PYGFLKLTYE VASICGNLPL GLHVLGTLLW GKSQADWIEE LPRLKDCLDG RIESVLKVGY 60
61 ESLYEKDQAL FLLIAVYFNY DYVDYVTSML ENTNVLDVRL GLKKLANRCL IQIDIDHNRK 120
121 SRVVMNRLLQ VMAREVISKQ KISKRKILED PQDICYVLEE AKGKGSALGL SLDVAEIKEL 180
181 VINKKAFKKM CNLLILKVFN GTDPRDSKLH VPEEMELPSS IRLLHWEAYP RKSFRFGPEN 240
241 LVTLNMEYSE LEKLWKGTQP LANLKEMNLC GSSCLKELPD LSKAANLERL DVAECNALVE 300
301 IPSSVANLHK IVNLHMESCE SLEVIPTLIN LASLKIINIH DCPRLKSFPD VPTSLEELVI 360
361 EKTGVQELPA SFRHCTGVTT LYICSNRNLK TFSTHLPMGL RKLDLSNCGI EWVTDSIKDL 420
421 HNLYYLKLSG CKRLVSLPEL PCSLECLFAE DCTS
|
| Detection Method: | |
| Confidence: | 11.30103 |
| Match: | 2z64A |
| Description: | No description for 2z64A was found. |
|
Region A: Residues: [818-897] |
1 11 21 31 41 51
| | | | | |
1 LERVSDSLNI PNAQFNFIKC FTLDREARRA IIQQSFVHGN VILPAREVLE EVDYRARGNC 60
61 LTIPPSAFNR FKVCVVLSIH
|
| Detection Method: | |
| Confidence: | 20.30103 |
| Match: | 1g9uA |
| Description: | Leucine rich effector protein YopM |
Matching Structure (courtesy of the PDB): |
|
