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Protein Overview: DEGP3_ARATH

General Information:
Name(s) found: DEGP3_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Putative protease Do-like 3, mitochondrial OS=Arabidopsis thaliana GN=DEGP3 PE=3 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 559 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IEA]
    Biological Process: proteolysis [IEA][ISS]
    Molecular Function: protein binding [IEA]
    catalytic activity [IEA]
    serine-type peptidase activity [ISS]
    serine-type endopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLCVRTVS RFRSLSRALA PGFLLLHGNA VPKTAVFFRQ QSSNTRLFSS YTAPSGVEEN  60
   61 NSKSALKNKL PPGKEVSSKD AKEKITTSAI DLALNSVVKV FTVSSKPRLF QPWQITMQSE 120
  121 STGSGFVISG KKILTNAHVV ANQTSVKVRK HGSTTKYKAK VQAVGHECDL AILEIDNDKF 180
  181 WEGMNPLELG DIPSMQDTVY VVGYPKGGDT ISVSKGVVSR VGPIKYSHSG TELLAIQIDA 240
  241 AINNGNSGGP VIMGNKVAGV AFESLCYSDS IGYIIPTPVI RHFLNAIEES GEDVSFGSIN 300
  301 LTYQKMDNDQ LRKDFKMSDK MTGILINKIN PLSDVHKVLK KDDIILAIDG VPIGNDSSVH 360
  361 FRKKERITFK HLVSMKKPCE TALLKVLREG KEYEFNSSLK SVPPLVPKRQ YDKSASYYIF 420
  421 GGLVFLPLTK PYIDSSCVSE SALGKMPKKA GEQVVIISQI LEDDINTGYS IFEDFQVKKV 480
  481 NGVQVHNLKH LYKLVEECCT ETVRMDLEKD KVITLDYKSA KKVTSKILKS LKIPSAVSED 540
  541 LQPKQQNKRS KVPPKSKEH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..559] PSI-BLAST 45.39794 Protease Do (DegP, HtrA), C-terminal domains; Protease Do (DegP, HtrA), catalytic domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein binding
    		•  2.10639523340529 bayes_pls_golite062009
  • hydrolase activity
    		•  1.95262287761731 bayes_pls_golite062009
  • binding
    		•  1.92577219161709 bayes_pls_golite062009
  • peptidase activity
    		•  0.892956033345508 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.644798716305534 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.323781287331288 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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