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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DEGP3_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLCVRTVS RFRSLSRALA PGFLLLHGNA VPKTAVFFRQ QSSNTRLFSS YTAPSGVEEN  60
   61 NSKSALKNKL PPGKEVSSKD AKEKITTSAI DLALNSVVKV FTVSSKPRLF QPWQITMQSE 120
  121 STGSGFVISG KKILTNAHVV ANQTSVKVRK HGSTTKYKAK VQAVGHECDL AILEIDNDKF 180
  181 WEGMNPLELG DIPSMQDTVY VVGYPKGGDT ISVSKGVVSR VGPIKYSHSG TELLAIQIDA 240
  241 AINNGNSGGP VIMGNKVAGV AFESLCYSDS IGYIIPTPVI RHFLNAIEES GEDVSFGSIN 300
  301 LTYQKMDNDQ LRKDFKMSDK MTGILINKIN PLSDVHKVLK KDDIILAIDG VPIGNDSSVH 360
  361 FRKKERITFK HLVSMKKPCE TALLKVLREG KEYEFNSSLK SVPPLVPKRQ YDKSASYYIF 420
  421 GGLVFLPLTK PYIDSSCVSE SALGKMPKKA GEQVVIISQI LEDDINTGYS IFEDFQVKKV 480
  481 NGVQVHNLKH LYKLVEECCT ETVRMDLEKD KVITLDYKSA KKVTSKILKS LKIPSAVSED 540
  541 LQPKQQNKRS KVPPKSKEH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle