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Protein Overview: gi|9758979, gi|1...

General Information:
Name(s) found: gi|9758979 [NCBI NR]
gi|15242300 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|9758979|dbj|BAB09489.1| disease resistance protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|15242300|ref|NP_199319.1| disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1165 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    apoptosis [IEA]
    defense response [ISS]
    Molecular Function: nucleotide binding [IEA]
    ATP binding [IEA]
    protein binding [IEA]
    transmembrane receptor activity [IEA]
    nucleoside-triphosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASSSSTGL PPQHQVFINF RGEDLRLGFV SHLVEALEND NIKVFIDNYA DKGEPLETLL  60
   61 TKIHDSKIAL AIFSGKYTES TWCLRELAMI KDCVEKGKLV AIPIFYKVDP STVRGVRGQF 120
  121 GDAFRDLEER DVIKKKEWKQ ALKWIPGLIG ITVHDKSPES EILNEIVKEV KKVLKKVSLE 180
  181 GSQKVVSVDP SQSIDTLSSV GGEKDKTFGI KQRLKELEEK LDLVKYKGTR VIGVVGMPGI 240
  241 GKTTLVKELY KTWQGKFSRY ALIDQIRGKS NNFRLECLPT LLLEKLLPEL NNPQLDSIEE 300
  301 PYKTHKGLLR ERKVLVVLDD VSRREQIYAL LGKYDLHSKH EWIKDGSRII IATNDISSLK 360
  361 GLVHDTYVVR QLNHRDGLQL FRYHAFHYDQ ATPPKVDFMK LSDEFVHYAR GHPLALKILG 420
  421 RELYEKNMKH WETKLIILAQ SPTTYIGEVV QVSYDELSLA QKDAFLDIAC FRSQDVDYVE 480
  481 SLLVSSDPGS AEAIKALKNK FLIDTCDGRV EMHDLLYRFS RELDLKASTQ GGSKQRRLWV 540
  541 RQDIINVQQK TMGAANVRGI FLDLSEVKVE TSLDREHFKN MRNLRYLKLY NSHCPHECLT 600
  601 NNKINMPDGL ELPLKEVRCL HWLKFPLEEL PNDFDPINLV DLKLPYSEIE RLWDGVKDTP 660
  661 VLKWVDLNHS SKLCSLSGLS KAQNLQRLNL EGCTSLESLR DVNLTSLKTL TLSNCSNFKE 720
  721 FPLIPENLKA LYLDGTSISQ LPDNVGNLKR LVLLNMKDCK VLETIPTCVS ELKTLQKLVL 780
  781 SGCSKLKEFP EINKSSLKIL LLDGTSIKTM PQLPSVQYLC LSRNDHLIYL PAGINQVSQL 840
  841 TRLDLKYCTK LTYVPELPPT LQYLDAHGCS SLKNVAKPLA RIMSTVQNHY TFNFTNCGNL 900
  901 EQAAKEEITS YAQRKCQLLS DARKHYNEGS EALFSTCFPG CEVPSWFGHE AVGSLLQRKL 960
  961 LPHWHDKRLS GIALCAVVSF PDSQDQLSCF SVTCTFKIKA EDKSWVPFTC PVGIWTREGN1020
 1021 KKDRIESDHV FIAYISSPHS IRCLEEKNSD KCNFSEASLE FTVTSDTSGI GVFKVLKCGL1080
 1081 SLVYENDKNK NSSLEAKYDV PVEVSFQEPE HGIMEEERYI NKRRSDDRRP KKKRKTKRDD1140
 1141 IMIISTVTQT CVPSVNARIE DKVTG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..150] FFAS03 3.84 Toll-like receptor 1, TLR1
    2 View Details [151..237] deduced N/A No confident structure predictions are available.
    3 View Details [238..391] PSI-BLAST 3.221849 Structure of the apoptotic protease-activating factor 1 bound to ADP
    4 View Details [392..939] PSI-BLAST 15.69897 No description for 2z64A was found.
    5 View Details [940..1071] PSI-BLAST 14.154902 The molecular structure of toll-like receptor 3 ligand binding domain
    6 View Details [1072..1165] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.166909062418251 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle