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Protein Overview: CDPKO_ARATH

General Information:
Name(s) found: CDPKO_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|91806299|gb|ABE65877.1| calcium-dependent protein kinase/CDPK [Arabidopsis thaliana] [NCBI NR]
  • gi|75337280|sp|Q9SIQ7.1|CDPKO_ARATH RecName: Full=Calcium-dependent protein kinase 24 [NCBI NR]
  • gi|4582467|gb|AAD24851.1| putative calcium-dependent protein kinase [Arabidopsis thaliana] [NCBI NR]
  • pir||E84721 probable calcium-dependent protein kinase [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|20198159|gb|AAM15433.1| putative calcium-dependent protein kinase [Arabidopsis thaliana] [NCBI NR]
  • gi|15225092|ref|NP_180708.1| CPK24; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase [Arabidopsis thaliana] [NCBI NR]
  • Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana GN=CPK24 PE=2 SV=1 [Swiss-Prot]
  • (Q9SIQ7) Putative Ca2+-dependent protein kinase (Putative calcium-dependent protein kinase) [athaliana3702.FASTAC.txt]
  • putative calcium-dependent protein kinase [Arabidopsis thaliana]gi|4582467|gb|AAD24851.1| putative calcium-dependent protein kinase [Arabidopsis thaliana]gi|15225092|ref|NP_180708.1| calcium-dependent protein kinase, putative / CDPK, putative [Arabidops [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Calcium-dependent protein kinase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: CPK24 | CPK24 (calcium-dependent protein kinase 24); calmodulin-dependent protein kinase/ kinase | chr2:13421093-13423401 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative calcium-dependent protein kinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • CPK24; ATP binding / calcium ion binding / calcium- and calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • calcium-dependent protein kinase/CDPK [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: CPK24 | calcium-dependent protein kinase 24 | chr2:13414016-13416324 FORWARD LENGTH=582 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 582 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: protein amino acid phosphorylation [IEA][ISS]
    Molecular Function: ATP binding [IEA]
    calcium ion binding [IEA]
    calmodulin-dependent protein kinase activity [ISS]
    protein kinase activity [IEA]
    protein serine/threonine kinase activity [IEA]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSCVSSPLK GSPFGKRPVR RRHSSNSRTS SVPRFDSSTN LSRRLIFQPP SRVLPEPIGD  60
   61 GIHLKYDLGK ELGRGEFGVT HECIEISTRE RFACKRISKE KLRTEIDVED VRREVEIMRC 120
  121 LPKHPNIVSF KEAFEDKDAV YLVMEICEGG ELFDRIVSRG HYTERAAASV AKTILEVVKV 180
  181 CHEHGVIHRD LKPENFLFSN GTETAQLKAI DFGLSIFFKP AQRFNEIVGS PYYMAPEVLR 240
  241 RNYGPEIDVW SAGVILYILL CGVPPFWAET EEGIAHAIVR GNIDFERDPW PKVSHEAKEL 300
  301 VKNMLDANPY SRLTVQEVLE HPWIRNAERA PNVNLGDNVR TKIQQFLLMN RFKKKVLRIV 360
  361 ADNLPNEEIA AIVQMFQTMD TDKNGHLTFE ELRDGLKKIG QVVPDGDVKM LMDAADTDGN 420
  421 GMLSCDEFVT LSIHLKRMGC DEHLQEAFKY FDKNGNGFIE LDELKVALCD DKLGHANGND 480
  481 QWIKDIFFDV DLNKDGRISF DEFKAMMKSG TDWKMASRQY SRALLNALSI KMFKEDFGDN 540
  541 GPKSHSMEFP IARKRAKLLD APKNKSMELQ ISKTYKPSGL RN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..380] PSI-BLAST 73.09691 CALMODULIN-DEPENDENT PROTEIN KINASE FROM RAT
    2 View Details [381..455] FFAS03 3.22 Calcium vector protein
    3 View Details [456..582] PSI-BLAST 24.0 Regulatory apparatus of Calcium Dependent protein kinase from Arabidopsis thaliana

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphotransferase activity, alcohol group as acceptor
    		•  5.49988294224815 bayes_pls_golite062009
  • protein kinase activity
    		•  5.4586557943719 bayes_pls_golite062009
  • kinase activity
    		•  5.3287080791198 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  4.96052051118534 bayes_pls_golite062009
  • protein serine/threonine kinase activity
    		•  4.46381887831481 bayes_pls_golite062009
  • calmodulin-dependent protein kinase activity
    		•  4.31938467136214 bayes_pls_golite062009
  • transferase activity
    		•  3.97138602499442 bayes_pls_golite062009
  • binding
    		•  2.74863538127007 bayes_pls_golite062009
  • tubulin binding
    		•  2.18641675163967 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  2.12615078788254 bayes_pls_golite062009
  • ATP binding
    		•  1.97600611746091 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  1.93596671856664 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  1.90928021591891 bayes_pls_golite062009
  • microtubule binding
    		•  1.88110801192607 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  1.65732943334212 bayes_pls_golite062009
  • ribonucleotide binding
    		•  1.65726906484847 bayes_pls_golite062009
  • purine nucleotide binding
    		•  1.63763394711025 bayes_pls_golite062009
  • nucleotide binding
    		•  1.63195828048121 bayes_pls_golite062009
  • protein tyrosine kinase activity
    		•  1.3898059094397 bayes_pls_golite062009
  • receptor signaling protein serine/threonine kinase activity
    		•  1.38496328649031 bayes_pls_golite062009
  • actin binding
    		•  1.33479685165255 bayes_pls_golite062009
  • gamma-tubulin binding
    		•  1.28511591054866 bayes_pls_golite062009
  • receptor signaling protein activity
    		•  1.27291233344322 bayes_pls_golite062009
  • protein binding
    		•  1.22565748038754 bayes_pls_golite062009
  • catalytic activity
    		•  1.21655087018101 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  0.612883428421652 bayes_pls_golite062009
  • transporter activity
    		•  0.553953601841147 bayes_pls_golite062009
  • cyclin-dependent protein kinase activity
    		•  0.499492353295369 bayes_pls_golite062009
  • protein serine/threonine/tyrosine kinase activity
    		•  0.48345772948903 bayes_pls_golite062009
  • magnesium ion binding
    		•  0.393328812780268 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.37676337669549 bayes_pls_golite062009
  • MAP kinase kinase kinase activity
    		•  0.37115026509016 bayes_pls_golite062009
  • MAP kinase kinase activity
    		•  0.35402045013148 bayes_pls_golite062009
  • signal transducer activity
    		•  0.270054246024761 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.270054246024761 bayes_pls_golite062009
  • actin filament binding
    		•  0.2403700250846 bayes_pls_golite062009
  • MAP kinase activity
    		•  0.08504542461349 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.0611721261859464 bayes_pls_golite062009
  • transmembrane receptor protein kinase activity
    		•  0.0556163711947139 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.00652065412910241 bayes_pls_golite062009
    2
    Term Confidence Notes
  • cytoskeletal protein binding
    		•  3.37000471863591 bayes_pls_golite062009
  • motor activity
    		•  3.1249083077713 bayes_pls_golite062009
  • binding
    		•  3.05873877511752 bayes_pls_golite062009
  • tubulin binding
    		•  2.47289019856128 bayes_pls_golite062009
  • actin binding
    		•  2.30442162024267 bayes_pls_golite062009
  • microtubule binding
    		•  2.1489822301796 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.53627323071172 bayes_pls_golite062009
  • kinase activity
    		•  1.5084125760881 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.38167703866348 bayes_pls_golite062009
  • protein binding
    		•  1.09433047543741 bayes_pls_golite062009
  • transferase activity
    		•  1.04568936971207 bayes_pls_golite062009
  • metal ion binding
    		•  0.917729143462208 bayes_pls_golite062009
  • cation binding
    		•  0.917729143462208 bayes_pls_golite062009
  • ion binding
    		•  0.911048755556638 bayes_pls_golite062009
  • actin filament binding
    		•  0.781511660560369 bayes_pls_golite062009
  • structural molecule activity
    		•  0.764402887442781 bayes_pls_golite062009
  • structural constituent of muscle
    		•  0.699876898567343 bayes_pls_golite062009
  • transporter activity
    		•  0.617351974698691 bayes_pls_golite062009
  • calcium ion binding
    		•  0.588882318835794 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.467743512816825 bayes_pls_golite062009
  • G-protein beta/gamma-subunit binding
    		•  0.409076621558761 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.368235648596438 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.261594391889186 bayes_pls_golite062009
  • DNA binding
    		•  0.126696463568471 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  0.114682464671044 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.0683555556984989 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle