| Protein: | CDPKO_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 582 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDPKO_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
444.0 | [0..1] | [582..1] |
|
Region A: Residues: [1-380] |
1 11 21 31 41 51
| | | | | |
1 MGSCVSSPLK GSPFGKRPVR RRHSSNSRTS SVPRFDSSTN LSRRLIFQPP SRVLPEPIGD 60
61 GIHLKYDLGK ELGRGEFGVT HECIEISTRE RFACKRISKE KLRTEIDVED VRREVEIMRC 120
121 LPKHPNIVSF KEAFEDKDAV YLVMEICEGG ELFDRIVSRG HYTERAAASV AKTILEVVKV 180
181 CHEHGVIHRD LKPENFLFSN GTETAQLKAI DFGLSIFFKP AQRFNEIVGS PYYMAPEVLR 240
241 RNYGPEIDVW SAGVILYILL CGVPPFWAET EEGIAHAIVR GNIDFERDPW PKVSHEAKEL 300
301 VKNMLDANPY SRLTVQEVLE HPWIRNAERA PNVNLGDNVR TKIQQFLLMN RFKKKVLRIV 360
361 ADNLPNEEIA AIVQMFQTMD
|
| Detection Method: |  |
| Confidence: | 73.09691 |
| Match: | 1a06A |
| Description: | CALMODULIN-DEPENDENT PROTEIN KINASE FROM RAT |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| phosphotransferase activity, alcohol group as acceptor | 5.49988294224815 | bayes_pls_golite062009 |
| protein kinase activity | 5.4586557943719 | bayes_pls_golite062009 |
| kinase activity | 5.3287080791198 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 4.96052051118534 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 4.46381887831481 | bayes_pls_golite062009 |
| calmodulin-dependent protein kinase activity | 4.31938467136214 | bayes_pls_golite062009 |
| transferase activity | 3.97138602499442 | bayes_pls_golite062009 |
| binding | 2.74863538127007 | bayes_pls_golite062009 |
| tubulin binding | 2.18641675163967 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.12615078788254 | bayes_pls_golite062009 |
| ATP binding | 1.97600611746091 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 1.93596671856664 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 1.90928021591891 | bayes_pls_golite062009 |
| microtubule binding | 1.88110801192607 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 1.65732943334212 | bayes_pls_golite062009 |
| ribonucleotide binding | 1.65726906484847 | bayes_pls_golite062009 |
| purine nucleotide binding | 1.63763394711025 | bayes_pls_golite062009 |
| nucleotide binding | 1.63195828048121 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 1.3898059094397 | bayes_pls_golite062009 |
| receptor signaling protein serine/threonine kinase activity | 1.38496328649031 | bayes_pls_golite062009 |
| actin binding | 1.33479685165255 | bayes_pls_golite062009 |
| gamma-tubulin binding | 1.28511591054866 | bayes_pls_golite062009 |
| receptor signaling protein activity | 1.27291233344322 | bayes_pls_golite062009 |
| protein binding | 1.22565748038754 | bayes_pls_golite062009 |
| catalytic activity | 1.21655087018101 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.612883428421652 | bayes_pls_golite062009 |
| transporter activity | 0.553953601841147 | bayes_pls_golite062009 |
| cyclin-dependent protein kinase activity | 0.499492353295369 | bayes_pls_golite062009 |
| protein serine/threonine/tyrosine kinase activity | 0.48345772948903 | bayes_pls_golite062009 |
| magnesium ion binding | 0.393328812780268 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.37676337669549 | bayes_pls_golite062009 |
| MAP kinase kinase kinase activity | 0.37115026509016 | bayes_pls_golite062009 |
| MAP kinase kinase activity | 0.35402045013148 | bayes_pls_golite062009 |
| signal transducer activity | 0.270054246024761 | bayes_pls_golite062009 |
| molecular transducer activity | 0.270054246024761 | bayes_pls_golite062009 |
| actin filament binding | 0.2403700250846 | bayes_pls_golite062009 |
| MAP kinase activity | 0.08504542461349 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.0611721261859464 | bayes_pls_golite062009 |
| transmembrane receptor protein kinase activity | 0.0556163711947139 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.00652065412910241 | bayes_pls_golite062009 |
|
Region A: Residues: [381-455] |
1 11 21 31 41 51
| | | | | |
1 TDKNGHLTFE ELRDGLKKIG QVVPDGDVKM LMDAADTDGN GMLSCDEFVT LSIHLKRMGC 60
61 DEHLQEAFKY FDKNG
|
| Detection Method: | |
| Confidence: | 3.22 |
| Match: | 1c7vA |
| Description: | Calcium vector protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cytoskeletal protein binding | 3.37000471863591 | bayes_pls_golite062009 |
| motor activity | 3.1249083077713 | bayes_pls_golite062009 |
| binding | 3.05873877511752 | bayes_pls_golite062009 |
| tubulin binding | 2.47289019856128 | bayes_pls_golite062009 |
| actin binding | 2.30442162024267 | bayes_pls_golite062009 |
| microtubule binding | 2.1489822301796 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.53627323071172 | bayes_pls_golite062009 |
| kinase activity | 1.5084125760881 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.38167703866348 | bayes_pls_golite062009 |
| protein binding | 1.09433047543741 | bayes_pls_golite062009 |
| transferase activity | 1.04568936971207 | bayes_pls_golite062009 |
| metal ion binding | 0.917729143462208 | bayes_pls_golite062009 |
| cation binding | 0.917729143462208 | bayes_pls_golite062009 |
| ion binding | 0.911048755556638 | bayes_pls_golite062009 |
| actin filament binding | 0.781511660560369 | bayes_pls_golite062009 |
| structural molecule activity | 0.764402887442781 | bayes_pls_golite062009 |
| structural constituent of muscle | 0.699876898567343 | bayes_pls_golite062009 |
| transporter activity | 0.617351974698691 | bayes_pls_golite062009 |
| calcium ion binding | 0.588882318835794 | bayes_pls_golite062009 |
| transcription regulator activity | 0.467743512816825 | bayes_pls_golite062009 |
| G-protein beta/gamma-subunit binding | 0.409076621558761 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.368235648596438 | bayes_pls_golite062009 |
| nucleic acid binding | 0.261594391889186 | bayes_pls_golite062009 |
| DNA binding | 0.126696463568471 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.114682464671044 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.0683555556984989 | bayes_pls_golite062009 |
|
Region A: Residues: [456-582] |
1 11 21 31 41 51
| | | | | |
1 NGFIELDELK VALCDDKLGH ANGNDQWIKD IFFDVDLNKD GRISFDEFKA MMKSGTDWKM 60
61 ASRQYSRALL NALSIKMFKE DFGDNGPKSH SMEFPIARKR AKLLDAPKNK SMELQISKTY 120
121 KPSGLRN
|
| Detection Method: | |
| Confidence: | 24.0 |
| Match: | 2aaoA |
| Description: | Regulatory apparatus of Calcium Dependent protein kinase from Arabidopsis thaliana |
Matching Structure (courtesy of the PDB): |
|
