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Protein Overview: RD19A_ARATH

General Information:
Name(s) found: RD19A_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|7270892|emb|CAB80572.1| drought-inducible cysteine proteinase RD19A precursor [Arabidopsis thaliana] [NCBI NR]
  • gi|541856|pir||JN0718 cysteine proteinase (EC 3.4.22.-) RD19A precursor, drought-inducible - Arabidopsis thaliana [NCBI NR]
  • gi|4539328|emb|CAB38829.1| drought-inducible cysteine proteinase RD19A precursor [Arabidopsis thaliana] [NCBI NR]
  • gi|435618|dbj|BAA02373.1| thiol protease [Arabidopsis thaliana] [NCBI NR]
  • gi|22136868|gb|AAM91778.1| putative cysteine proteinase RD19A [Arabidopsis thaliana] [NCBI NR]
  • gi|19310552|gb|AAL85009.1| putative cysteine proteinase RD19A [Arabidopsis thaliana] [NCBI NR]
  • gi|18420375|ref|NP_568052.1| RD19 (RESPONSIVE TO DEHYDRATION 19); cysteine-type endopeptidase/ cysteine-type peptidase [Arabidopsis thaliana] [NCBI NR]
  • gi|1172872|sp|P43296.1|RD19A_ARATH RecName: Full=Cysteine proteinase RD19a; Short=RD19; Flags: Precursor [NCBI NR]
  • gi|110740898|dbj|BAE98545.1| drought-inducible cysteine proteinase RD19A precursor [Arabidopsis thaliana] [NCBI NR]
  • (P43296) Cysteine proteinase RD19a precursor (EC 3.4.22.-) (RD19) [Swiss-Prot]
  • Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1 [Swiss-Prot]
  • putative cysteine proteinase RD19A [Arabidopsis thaliana]gi|19310552|gb|AAL85009.1| putative cysteine proteinase RD19A [Arabidopsis thaliana]gi|435618|dbj|BAA02373.1| thiol protease [Arabidopsis thaliana]gi|7270892|emb|CAB80572.1| drought-inducible cys [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Cysteine proteinase RD19a precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: RD19A, RD19 | RD19 (RESPONSIVE TO DEHYDRATION 19); cysteine-type peptidase | chr4:18215820-18217320 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • thiol protease [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • drought-inducible cysteine proteinase RD19A precursor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative cysteine proteinase RD19A [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • RD19 (RESPONSIVE TO DEHYDRATION 19); cysteine-type peptidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Cysteine proteinase RD19a precursor (RD19) [nr-271106-contam.fasta]
  • | Symbols: RD19, RD19A | Papain family cysteine protease | chr4:18215826-18217326 REVERSE LENGTH=368 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 368 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    vacuole [IDA]
    Biological Process: response to salt stress [IEP]
    proteolysis [ISS]
    response to osmotic stress [IGI]
    response to desiccation [IEP]
    defense response to bacterium [IMP]
    response to water deprivation [TAS]
    Molecular Function: cysteine-type endopeptidase activity [ISS]
    cysteine-type peptidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRLKLYFSV FVLSFFIVSV SSSDVNDGDD LVIRQVVGGA EPQVLTSEDH FSLFKRKFGK  60
   61 VYASNEEHDY RFSVFKANLR RARRHQKLDP SATHGVTQFS DLTRSEFRKK HLGVRSGFKL 120
  121 PKDANKAPIL PTENLPEDFD WRDHGAVTPV KNQGSCGSCW SFSATGALEG ANFLATGKLV 180
  181 SLSEQQLVDC DHECDPEEAD SCDSGCNGGL MNSAFEYTLK TGGLMKEEDY PYTGKDGKTC 240
  241 KLDKSKIVAS VSNFSVISID EEQIAANLVK NGPLAVAINA GYMQTYIGGV SCPYICTRRL 300
  301 NHGVLLVGYG AAGYAPARFK EKPYWIIKNS WGETWGENGF YKICKGRNIC GVDSMVSTVA 360
  361 ATVSTTAH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..368] PSI-BLAST 79.0 (Pro)cathepsin L

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  4.90619850296986 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  4.64381885397949 bayes_pls_golite062009
  • endopeptidase activity
    		•  3.75054525912786 bayes_pls_golite062009
  • hydrolase activity
    		•  3.74079711298952 bayes_pls_golite062009
  • cysteine-type peptidase activity
    		•  2.71117522993364 bayes_pls_golite062009
  • cysteine-type endopeptidase activity
    		•  1.95802900199539 bayes_pls_golite062009
  • binding
    		•  1.29265216891074 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  1.12653729823589 bayes_pls_golite062009
  • catalytic activity
    		•  1.05972260874031 bayes_pls_golite062009
  • tubulin binding
    		•  0.80007793113729 bayes_pls_golite062009
  • protein binding
    		•  0.774177093888744 bayes_pls_golite062009
  • microtubule binding
    		•  0.752289145309061 bayes_pls_golite062009
  • small conjugating protein-specific protease activity
    		•  0.649171767629235 bayes_pls_golite062009
  • thiolester hydrolase activity
    		•  0.59115205419466 bayes_pls_golite062009
  • kininogen binding
    		•  0.41283715939055 bayes_pls_golite062009
  • signal transducer activity
    		•  0.12644030784065 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.12644030784065 bayes_pls_golite062009
  • structural molecule activity
    		•  0.102555314244558 bayes_pls_golite062009
  • ubiquitin-specific protease activity
    		•  0.0101379718864654 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle