| Protein: | RD19A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 368 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RD19A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
366.0 | [0..1] | [368..1] |
|
Region A: Residues: [1-368] |
1 11 21 31 41 51
| | | | | |
1 MDRLKLYFSV FVLSFFIVSV SSSDVNDGDD LVIRQVVGGA EPQVLTSEDH FSLFKRKFGK 60
61 VYASNEEHDY RFSVFKANLR RARRHQKLDP SATHGVTQFS DLTRSEFRKK HLGVRSGFKL 120
121 PKDANKAPIL PTENLPEDFD WRDHGAVTPV KNQGSCGSCW SFSATGALEG ANFLATGKLV 180
181 SLSEQQLVDC DHECDPEEAD SCDSGCNGGL MNSAFEYTLK TGGLMKEEDY PYTGKDGKTC 240
241 KLDKSKIVAS VSNFSVISID EEQIAANLVK NGPLAVAINA GYMQTYIGGV SCPYICTRRL 300
301 NHGVLLVGYG AAGYAPARFK EKPYWIIKNS WGETWGENGF YKICKGRNIC GVDSMVSTVA 360
361 ATVSTTAH
|
| Detection Method: |  |
| Confidence: | 79.0 |
| Match: | 1cs8A |
| Description: | (Pro)cathepsin L |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 4.90619850296986 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 4.64381885397949 | bayes_pls_golite062009 |
| endopeptidase activity | 3.75054525912786 | bayes_pls_golite062009 |
| hydrolase activity | 3.74079711298952 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 2.71117522993364 | bayes_pls_golite062009 |
| cysteine-type endopeptidase activity | 1.95802900199539 | bayes_pls_golite062009 |
| binding | 1.29265216891074 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.12653729823589 | bayes_pls_golite062009 |
| catalytic activity | 1.05972260874031 | bayes_pls_golite062009 |
| tubulin binding | 0.80007793113729 | bayes_pls_golite062009 |
| protein binding | 0.774177093888744 | bayes_pls_golite062009 |
| microtubule binding | 0.752289145309061 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 0.649171767629235 | bayes_pls_golite062009 |
| thiolester hydrolase activity | 0.59115205419466 | bayes_pls_golite062009 |
| kininogen binding | 0.41283715939055 | bayes_pls_golite062009 |
| signal transducer activity | 0.12644030784065 | bayes_pls_golite062009 |
| molecular transducer activity | 0.12644030784065 | bayes_pls_golite062009 |
| structural molecule activity | 0.102555314244558 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 0.0101379718864654 | bayes_pls_golite062009 |
