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Protein Overview: lgc-4

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..85] deduced N/A No confident structure predictions are available.
2 View Details [86..417] PSI-BLAST 83.0 Refined structure of the nicotinic acetylcholine receptor at 4A resolution.
3 View Details [418..554] PSI-BLAST 41.69897 Acetylcholine receptor protein, beta chain
4 View Details [555..615] MSA 2.064997 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3
Term Confidence Notes
  • extracellular ligand-gated ion channel activity
  • 10.1234885291809 bayes_pls_golite062009
  • excitatory extracellular ligand-gated ion channel activity
  • 10.1234885291809 bayes_pls_golite062009
  • nicotinic acetylcholine-activated cation-selective channel activity
  • 10.0780542200909 bayes_pls_golite062009
  • cation channel activity
  • 8.5858052761298 bayes_pls_golite062009
  • passive transmembrane transporter activity
  • 8.57620608456081 bayes_pls_golite062009
  • channel activity
  • 8.57620608456081 bayes_pls_golite062009
  • ion channel activity
  • 8.50385648276422 bayes_pls_golite062009
  • gated channel activity
  • 8.45472729106126 bayes_pls_golite062009
  • substrate-specific channel activity
  • 8.38189052202481 bayes_pls_golite062009
  • acetylcholine binding
  • 8.16606736207577 bayes_pls_golite062009
  • ligand-gated channel activity
  • 8.02211931922735 bayes_pls_golite062009
  • ligand-gated ion channel activity
  • 8.02211931922735 bayes_pls_golite062009
  • acetylcholine receptor activity
  • 7.93415141778179 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
  • 7.84962233148559 bayes_pls_golite062009
  • amine binding
  • 6.94698730333481 bayes_pls_golite062009
  • chloride channel regulator activity
  • 4.09042405830166 bayes_pls_golite062009
  • transmembrane receptor activity
  • 3.69657181531883 bayes_pls_golite062009
  • neurotransmitter binding
  • 3.68012973608441 bayes_pls_golite062009
  • receptor activity
  • 3.60196173798811 bayes_pls_golite062009
  • neurotransmitter receptor activity
  • 3.53144805298686 bayes_pls_golite062009
  • ion transmembrane transporter activity
  • 3.03819521978304 bayes_pls_golite062009
  • cation transmembrane transporter activity
  • 2.99543590661304 bayes_pls_golite062009
  • molecular transducer activity
  • 2.5795406626011 bayes_pls_golite062009
  • signal transducer activity
  • 2.5795406626011 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
  • 2.38330137522171 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 2.33346254375562 bayes_pls_golite062009
  • beta-amyloid binding
  • 2.17121190042039 bayes_pls_golite062009
  • transmembrane transporter activity
  • 1.87616162898157 bayes_pls_golite062009
  • transporter activity
  • 1.81491862158336 bayes_pls_golite062009
  • binding
  • 1.72719973055207 bayes_pls_golite062009
  • drug binding
  • 1.40945164171836 bayes_pls_golite062009
  • protein binding
  • 0.154593355721805 bayes_pls_golite062009
    4 No functions predicted.




    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle