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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: lgc-4
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIICYSCLTV SILLTIKFVP CRFAGIEHQN TKSRVHFSLL DSRQENDTNH FEIAEAKFQK  60
   61 PHNEENTIGT ITKFAPSVQE QHSSAVIPMP HFDQNRLEQA LRIKGSIDGT EEALYRSLLD 120
  121 HTVYEKDVRP CIHHSQPTNV TFGFLLNQIV EMDERNQALT TRSWLNINWM DPRLSWNESL 180
  181 WSEIKAIYIP HARIWKPDII LVNNAIREYY ASLVSTDVMV TSDGNVTWLF SALFRSSCPI 240
  241 RVRYYPFDDQ QCDLKFASWS HDITEINLGL NTDKGDLSSY MNNSEFDLVD MTAVREVVTF 300
  301 PSDTNSDWPI IVIRIHMHRR PLFYVFNHIV PCVLISSMAV LGFLMPPETG EKINMIITTL 360
  361 LSMGVYLQSI TESIPPTSEG VPLIGMYYVS SLLMVCLATC VNVITLNMHR NGAANQGRHV 420
  421 PAWMQKWILG YLATFMRMSI REPDSIALLK ASQSKKSTIR RSSILRDLKR VKNMSNVRAK 480
  481 SKEQNANREC ECMDPLVHIY AESIMSCLAA DTKPMNGSTI REDFASESTF LGRVVSDGIM 540
  541 PRISASSNSV LTEFETRFRR ILKRVYRSLQ QHEIREEILD ERSRIQCSGN NLHLSLIDFY 600
  601 YVFFALQHCS QSSAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle