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Protein Overview: CE34904

General Information:
Name(s) found: CE34904 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00019212 status:Partially_confirmed UniProt:Q95X57 protein_id:CCD72396.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 453 amino acids

    Gene Ontology:
    Cellular Component: proteinaceous extracellular matrix [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    proteolysis [IEALink to PubMed article]
    metabolic process [IEALink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    metalloendopeptidase activity [IEALink to PubMed article]
    metallopeptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARCRRISGG GIRQKVFNTH NCASFSGSNG KVWLSQRHRS LVTARISASS HVLPSEVLEV  60
   61 EQTGNVDEMT VEAASKPRCT QTDVRQEQTK RTKRFTLSKR AKWAHASGQS VTLKWYISDY 120
  121 TSDIDRLETR KVVEKAFKLW SSQSYIKNEK KVTLTFQEAS SKDEADINIL WAEGNHGDEH 180
  181 DFDGANGKIE GNKKENVLAH TFFPGYARPL NGDIHFDDAE DWEIDVDQVG HGSNKRFFPY 240
  241 VLAHEIGHAL GLDHSQKADA LMHPYYKNVP INEIQLDIDD KCGVIWNYGG ASDFCLYVWL 300
  301 MSQIVEAHNS SAQNNHGVGS ITSSRTNKKS FKNSKIPKCS SNNSSQRTLA EKKLTLGLHL 360
  361 SEADAKRYTE MVCNFLAGLH MWRTNPNHHA SESLEKEYKG VSQEMGTFSG KSIAVRRLIR 420
  421 HAEHQKERSE KGPLDPDYFD DDFFENFFME YSK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..453] PSI-BLAST 94.0 X-ray structure of human proMMP-1: New insights into collagenase action

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  5.33358263548929 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  4.99457783001146 bayes_pls_golite062009
  • endopeptidase activity
    		•  4.16532996235931 bayes_pls_golite062009
  • metallopeptidase activity
    		•  3.94798058866011 bayes_pls_golite062009
  • metalloendopeptidase activity
    		•  3.43236442601127 bayes_pls_golite062009
  • hydrolase activity
    		•  2.63109625301237 bayes_pls_golite062009
  • receptor binding
    		•  2.39767049122449 bayes_pls_golite062009
  • exopeptidase activity
    		•  2.07461908743946 bayes_pls_golite062009
  • fibronectin binding
    		•  1.96176072874085 bayes_pls_golite062009
  • binding
    		•  1.08558665967526 bayes_pls_golite062009
  • catalytic activity
    		•  0.891187593353827 bayes_pls_golite062009
  • growth factor activity
    		•  0.720944017870466 bayes_pls_golite062009
  • integrin binding
    		•  0.57684135424992 bayes_pls_golite062009
  • zinc ion binding
    		•  0.49304764842799 bayes_pls_golite062009
  • aminopeptidase activity
    		•  0.489265029264191 bayes_pls_golite062009
  • serine hydrolase activity
    		•  0.393080846858665 bayes_pls_golite062009
  • serine-type peptidase activity
    		•  0.374597710524442 bayes_pls_golite062009
  • protein binding
    		•  0.2751534129453 bayes_pls_golite062009
  • peptidyl-dipeptidase activity
    		•  0.27229268642689 bayes_pls_golite062009
  • serine-type endopeptidase activity
    		•  0.252655558968584 bayes_pls_golite062009
  • cytokine receptor binding
    		•  0.0255053415182105 bayes_pls_golite062009
  • ion binding
    		•  0.0127744064783182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle