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Protein Overview: alh-1

General Information:
Name(s) found: alh-1 / CE29809 [WormBase]
Description(s) found:
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  • WBGene00000107 locus:alh-1 status:Confirmed UniProt:Q20780 protein_id:CCD67408.1 [WormBase]
  • gi|25144435|ref|NP_498081.2| ALdehyde deHydrogenase family member (alh-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|16950426|gb|AAA20615.3| Aldehyde dehydrogenase protein 1, isoform a [Caenorhabditis elegans] [NCBI NR]
  • [wormpep79.fasta]
  • CE29809 WBGene00000107 locus:alh-1 Aldehyde dehydrogenase 2 status:Confirmed TR:Q20780 protein_id:AAA20615.3 [wormpep150.fasta]
  • 29809 WBGene00000107 locus:alh-1 Aldehyde dehydrogenase 2 status:Confirmed TR:Q20780 protein_id:AAA20615.3 [wormpep130-phg-ecoli-orf-rand.fasta]
  • ALDH1J1, ALdehyde deHydrogenase (55.1 kD) (alh-1) [Caenorhabditis elegans]gi|16950426|gb|AAA20615.3| Aldehyde dehydrogenase protein 1, isoform a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • locus:alh-1 Aldehyde dehydrogenase 2 status:Confirmed TR:Q20780 protein_id:AAA20615.3 [wormpep115.fasta.reversed]
  • CE29809 Aldehyde dehydrogenase 2 status:Confirmed TR:Q20780 protein_id:AAA20615.3 [wormpep80.hongbin]
  • CE29809 WBGene00000107 locus:alh-1 Aldehyde dehydrogenase 2 status:Confirmed UniProt:Q20780_CAEEL protein_id:AAA20615.3 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE29809 WBGene00000107 locus:alh-1 Aldehyde dehydrogenase 2 status:Confirmed UniProt:Q20780_CAEEL protein_id:AAA20615.3| [wormORF-contam.fasta]
  • Aldehyde dehydrogenase protein 1, isoform a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • ALdehyde deHydrogenase family member (alh-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE29809 WBGene00000107 locus:alh-1 Aldehyde dehydrogenase 2 status:Confirmed UniProt:Q20780 protein_id:AAA20615.3 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE29809 WBGene00000107 locus:alh-1 Aldehyde dehydrogenase 2 status:Confirmed UniProt:Q20780 protein_id:CCD67408.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE29809 WBGene00000107 locus:alh-1 status:Confirmed UniProt:Q20780 protein_id:CCD67408.1 Aldehyde dehydrogenase [wormpep246-ecoli-contam.fasta]
  • ALdehyde deHydrogenase OS=Caenorhabditis elegans GN=alh-1 PE=1 SV=3 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 510 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial matrix [IEALink to PubMed article]
    cytoplasm [IEALink to PubMed article]
    Biological Process: cellular aldehyde metabolic process [IEALink to PubMed article]
    metabolic process [IEALink to PubMed article]
    10-formyltetrahydrofolate catabolic process [IEALink to PubMed article]
    proline biosynthetic process [IEALink to PubMed article]
    valine metabolic process [IEALink to PubMed article]
    betaine biosynthetic process [IEALink to PubMed article]
    one-carbon metabolic process [IEALink to PubMed article]
    Molecular Function: 1-pyrroline-5-carboxylate dehydrogenase activity [IEALink to PubMed article]
    betaine-aldehyde dehydrogenase activity [IEALink to PubMed article]
    oxidoreductase activity [IEALink to PubMed article]
    aldehyde dehydrogenase [NAD(P)+] activity [IEALink to PubMed article]
    methylmalonate-semialdehyde dehydrogenase (acylating) activity [IEALink to PubMed article]
    formyltetrahydrofolate dehydrogenase activity [IEALink to PubMed article]
    oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRSALRATV QARNASGVPP GLSNMKPQYT GIFINNEFVP AKSGKTFETI NPANGKVLAQ  60
   61 VAEGDKTDVN IAVKAAQNAF RIGSEWRRMD ASQRGVLLNR LADLMERDRV ILASLESLDN 120
  121 GKPYAVAYNA DLPLSIKTLR YYAGWADKNH GKTIPIEGDY FTYTRHEPVG VCGQIIPWNF 180
  181 PLLMQAWKLG PALAMGNTVV MKVAEQTPLS ALHVAALTKE AGFPDGVVNI IPGYGHTAGQ 240
  241 AISSHMDVDK VAFTGSTEVG RLVMKAAAES NVKKVTLELG GKSPNIIFAD ADLNDSVHQA 300
  301 NHGLFFNQGQ CCCAGSRTFV EGKIYDDFVA RSKELAEKAV IGDPFDLKTT QGPQVDGKQV 360
  361 ETILKYIAAG KKDGAQLVTG GAKHGDQGHF VKPTIFANVK DQMTIAQEEI FGPVMTIIRF 420
  421 DTMEELVEKA NNTIYGLAAG VMTKDIDKAL HIANATRAGS VWVNCYDVFD AAAPFGGFKQ 480
  481 SGIGRELGEY GLEAYTEVKT VTIKVPQKNS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..510] PSI-BLAST 1000.0 Aldehyde reductase (dehydrogenase), ALDH

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  5.09598561374689 bayes_pls_golite062009
  • oxidoreductase activity
    		•  4.47226217021998 bayes_pls_golite062009
  • 1-pyrroline-5-carboxylate dehydrogenase activity
    		•  4.35175408702761 bayes_pls_golite062009
  • malonate-semialdehyde dehydrogenase (acetylating) activity
    		•  4.2273960318884 bayes_pls_golite062009
  • methylmalonate-semialdehyde dehydrogenase (acylating) activity
    		•  3.87605237828483 bayes_pls_golite062009
  • succinate-semialdehyde dehydrogenase [NAD(P)+] activity
    		•  3.64672165191647 bayes_pls_golite062009
  • 3-chloroallyl aldehyde dehydrogenase activity
    		•  3.37049090049734 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
    		•  3.2867555127991 bayes_pls_golite062009
  • benzaldehyde dehydrogenase activity
    		•  2.99564252244797 bayes_pls_golite062009
  • aldehyde dehydrogenase (NAD) activity
    		•  2.81851373615334 bayes_pls_golite062009
  • catalytic activity
    		•  2.80804701752928 bayes_pls_golite062009
  • glutamate-5-semialdehyde dehydrogenase activity
    		•  2.78416888468693 bayes_pls_golite062009
  • succinate-semialdehyde dehydrogenase activity
    		•  2.71501590413507 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH group of donors
    		•  2.70230501280821 bayes_pls_golite062009
  • aldehyde dehydrogenase [NAD(P)+] activity
    		•  2.43250909158896 bayes_pls_golite062009
  • aminobutyraldehyde dehydrogenase activity
    		•  2.35958138496479 bayes_pls_golite062009
  • acyl-CoA binding
    		•  2.26220696569489 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
    		•  1.6559690223037 bayes_pls_golite062009
  • retinal dehydrogenase activity
    		•  1.42867174920845 bayes_pls_golite062009
  • binding
    		•  1.06673666884196 bayes_pls_golite062009
  • retinoid binding
    		•  0.983782635681687 bayes_pls_golite062009
  • isoprenoid binding
    		•  0.900374761028287 bayes_pls_golite062009
  • protein binding
    		•  0.894945263794726 bayes_pls_golite062009
  • histidinol dehydrogenase activity
    		•  0.258030369394064 bayes_pls_golite062009
  • benzaldehyde dehydrogenase (NAD+) activity
    		•  0.23487570676521 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle