YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gpa-18

General Information:
Name(s) found: gpa-18 / CE40662 [WormBase]
Description(s) found:
Found 8 descriptions.
SHOW ALL
  • WBGene00020997 locus:gpa-18 status:Partially_confirmed UniProt:A1IMC0 protein_id:CCD65516.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 335 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: G-protein coupled receptor protein signaling pathway [IEALink to PubMed article]
    Molecular Function: guanyl nucleotide binding [IEALink to PubMed article]
    signal transducer activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSAGSVDRG PIRTLVLGCM GAGKTSFIRQ MVKNHTKSIC LRRELYLYCV QLNLLNIYRE  60
   61 LKNVIEALEI PISEDQVTIL NNFDSKSTFT KQRFTQLDEY RHREVFPPKI IEAMKELFES 120
  121 GLYELCRLRQ RILPLPQNYH FLFQRGDDFM NPEYVPSELE IMMSYSQTCG LNRENVTCQG 180
  181 YKFELLEMPG HHLWRAKWAD YFDDPNLVVF VIDLSELCDP AFYNYFQKGY LENKTVTVFE 240
  241 SLVNNPVLAK VYWLLLFNKA DTFNDHSAGF DFRKLANHLD TADSARSFYR SQFTTKISKT 300
  301 RCFPHIVSLV NESQSVMMEM FKKIGKMHRE RPNLM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..335] PSI-BLAST 100.0 Structure of the K180P mutant of Gi alpha subunit bound to AlF4 and GDP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • GTPase activity
    		•  4.8977602956056 bayes_pls_golite062009
  • guanyl nucleotide binding
    		•  2.37366263422025 bayes_pls_golite062009
  • GTP binding
    		•  2.15418131491052 bayes_pls_golite062009
  • G-protein-coupled receptor binding
    		•  2.06898720161422 bayes_pls_golite062009
  • binding
    		•  2.00548409930693 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  1.63949223587737 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  1.21658213854831 bayes_pls_golite062009
  • ribonucleotide binding
    		•  1.21652144153182 bayes_pls_golite062009
  • purine nucleotide binding
    		•  1.21571071905795 bayes_pls_golite062009
  • nucleotide binding
    		•  1.20347573865566 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.683309012097319 bayes_pls_golite062009
  • signal transducer activity
    		•  0.683309012097319 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.661834961742057 bayes_pls_golite062009
  • receptor activity
    		•  0.633514002718998 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.398651949563863 bayes_pls_golite062009
  • guanyl ribonucleotide binding
    		•  0.372638007722845 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.329606804913681 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.310343974731494 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.308125979591209 bayes_pls_golite062009
  • ATP binding
    		•  0.20901529484652 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.193888824779002 bayes_pls_golite062009
  • metabotropic serotonin receptor binding
    		•  0.178039386254807 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.176038316016909 bayes_pls_golite062009
  • protein binding
    		•  0.170837278876362 bayes_pls_golite062009
  • opioid receptor binding
    		•  0.105073376987609 bayes_pls_golite062009
  • mu-type opioid receptor binding
    		•  0.105073376987609 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0340518447528398 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle