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Protein Overview: asp-6

General Information:
Name(s) found: asp-6 / CE09542 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00000219 locus:asp-6 Aspartic protease 6 status:Confirmed UniProt:O01530 protein_id:CCD64751.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 389 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cell death [IMPLink to PubMed article]
    proteolysis [IEALink to PubMed article]
    Molecular Function: aspartic-type endopeptidase activity [IEALink to PubMed article]
    pepsin A activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTFILLAVL GLASASVHQH KIVWRESKKM GMIRTGQYPA YLEYQRNLRA VSPNVLANLP  60
   61 QNVNDFGDFE YLGNITIGTP DQGFIVVLDT GSSNLWIPGP TCKTNCKTKS KFDSTASSTF 120
  121 VKNGKSWTIQ YGSGDAAGIL GQDTVRFGAK GDSQLSVPTT TFGIASKISA DFKNDATDGI 180
  181 LGLAFTSLAV DGVVPPLINA INQGILDQPL FSVWLEHRGA ANNVGGGVFT YGAIDTTNCG 240
  241 ALVAYQPLSS ATYYQFKAAG FKLGSYSNTK TVDVISDTGT SFLGGPQSVV DGLAKAAGAT 300
  301 YDDFNEVYFI DCAAQPGTLD ITIGTNTYSI QPVNYIVDAG NGQCLFAAFP FDFGGFGPSW 360
  361 ILGDPFIRQY CNIYDIGNKR MGFAPSLQK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..389] PSI-BLAST 85.39794 REFINED STRUCTURE OF PORCINE PEPSINOGEN AT 1.8 ANGSTROMS RESOLUTION

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • aspartic-type endopeptidase activity
    		•  7.9145950161796 bayes_pls_golite062009
  • aspartic-type peptidase activity
    		•  7.9145950161796 bayes_pls_golite062009
  • peptidase activity
    		•  5.78181196721293 bayes_pls_golite062009
  • endopeptidase activity
    		•  5.4888481808613 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  5.39972232367526 bayes_pls_golite062009
  • hydrolase activity
    		•  4.34796304893506 bayes_pls_golite062009
  • catalytic activity
    		•  1.54514410489082 bayes_pls_golite062009
  • binding
    		•  1.10054369202721 bayes_pls_golite062009
  • receptor binding
    		•  0.561225023505917 bayes_pls_golite062009
  • protein binding
    		•  0.193907750061394 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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