YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	asp-6
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTFILLAVL GLASASVHQH KIVWRESKKM GMIRTGQYPA YLEYQRNLRA VSPNVLANLP  60
   61 QNVNDFGDFE YLGNITIGTP DQGFIVVLDT GSSNLWIPGP TCKTNCKTKS KFDSTASSTF 120
  121 VKNGKSWTIQ YGSGDAAGIL GQDTVRFGAK GDSQLSVPTT TFGIASKISA DFKNDATDGI 180
  181 LGLAFTSLAV DGVVPPLINA INQGILDQPL FSVWLEHRGA ANNVGGGVFT YGAIDTTNCG 240
  241 ALVAYQPLSS ATYYQFKAAG FKLGSYSNTK TVDVISDTGT SFLGGPQSVV DGLAKAAGAT 300
  301 YDDFNEVYFI DCAAQPGTLD ITIGTNTYSI QPVNYIVDAG NGQCLFAAFP FDFGGFGPSW 360
  361 ILGDPFIRQY CNIYDIGNKR MGFAPSLQK

Type	Start	End	Confidence
Signal Peptide	1	19	0.96
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	389	0.99