YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: acs-6

General Information:
Name(s) found: acs-6 / CE07642 [WormBase]
Description(s) found:
Found 20 descriptions.
SHOW ALL
  • WBGene00022849 locus:acs-6 status:Partially_confirmed UniProt:Q23404 protein_id:CCD73714.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 565 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: propionate catabolic process, 2-methylcitrate cycle [IEALink to PubMed article]
    teichoic acid biosynthetic process [IEALink to PubMed article]
    metabolic process [IEALink to PubMed article]
    menaquinone biosynthetic process [IEALink to PubMed article]
    siderophore biosynthetic process [IEALink to PubMed article]
    Molecular Function: D-alanine-poly(phosphoribitol) ligase activity [IEALink to PubMed article]
    AMP binding [IEALink to PubMed article]
    acetate-CoA ligase activity [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]
    propionate-CoA ligase activity [IEALink to PubMed article]
    o-succinylbenzoate-CoA ligase activity [IEALink to PubMed article]
    (2,3-dihydroxybenzoyl)adenylate synthase activity [IEALink to PubMed article]
    ligase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFVSKAASV KLSTTTVHER IFEACRIHAS ANKDAVCFID AETTTKKKLY KDVEPTVNSL  60
   61 ATALVKLGFK PGDVASQAFP NCPEFLVAML AVMKCGGAMS NASAIFTDYE LQLQFCDSNT 120
  121 SIVFTDEDRL ARIRRATAKC PGVRKIICLR TFPLRTEFPE NVLDYVELTQ TPDQPINVNV 180
  181 SMDSIALLPY SSGTTGRPKG CQLTHRNIGA MLDVAKAHLE TDVAPAMFGK EKATWHKEHT 240
  241 VLLLPWYHAY GLNTMFETIL LGMTGIVFKK FDTIVMLNRI KFYKVKLAWL VPPMLIFLAK 300
  301 DPMVPIFNTA PFLKVIMSAG ATAGKQLCEE VSKRFPNAWL CQAYGMTEMV QFTTIPRFED 360
  361 GNCFETVGNL ASTYELKILD KEKKEITTIN TVGQLCFRGP TVMKGYLKRE EADIIDKDGF 420
  421 LLTGDLGSID DKGRIHVTGR IKELIKVNGM QVPPVEIEDV LLLHPKVKDC AVIGVPDEHK 480
  481 GESPKAYIVK KDHTLTEAEL TEFVRQKLSS YKWIDTYEFI DSIPKLPSGK IQRKKLKKMA 540
  541 ESSGSTESEA SEPSQSERSS HSIRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..565] PSI-BLAST 109.0 FIREFLY LUCIFERASE IN COMPLEX WITH BROMOFORM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity, forming carbon-sulfur bonds
    		•  5.10123876514454 bayes_pls_golite062009
  • fatty acid ligase activity
    		•  4.83067429373059 bayes_pls_golite062009
  • long-chain fatty acid-CoA ligase activity
    		•  4.72692389032116 bayes_pls_golite062009
  • acetate-CoA ligase activity
    		•  4.48129067128523 bayes_pls_golite062009
  • acid-thiol ligase activity
    		•  4.28278725989432 bayes_pls_golite062009
  • CoA-ligase activity
    		•  4.12850865352867 bayes_pls_golite062009
  • Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing) activity
    		•  2.74744781333102 bayes_pls_golite062009
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)
    		•  2.74744781333102 bayes_pls_golite062009
  • luciferin monooxygenase activity
    		•  2.67396462766343 bayes_pls_golite062009
  • ligase activity
    		•  2.49556073715112 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.31193176808353 bayes_pls_golite062009
  • catalytic activity
    		•  1.83545185797733 bayes_pls_golite062009
  • binding
    		•  1.5312519256537 bayes_pls_golite062009
  • transcription repressor activity
    		•  1.2638869228049 bayes_pls_golite062009
  • acetoacetate-CoA ligase activity
    		•  1.03788694975627 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.519946577969422 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.500908589473269 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.398310577427897 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.283236127656661 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.283214450918389 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.271435169336222 bayes_pls_golite062009
  • nucleotide binding
    		•  0.263031065274377 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle