Protein Overview: pmp-3

General Information:
Name(s) found:	pmp-3 / CE05518 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00004060 locus:pmp-3 status:Confirmed UniProt:Q18843 protein_id:CAA99810.1 [WormBase] pir\|\|T20228 hypothetical protein C54G10.3 - Caenorhabditis elegans [NCBI NR] gi\|3875241\|emb\|CAA99810.1\| C. elegans protein C54G10.3, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR] gi\|17558960\|ref\|NP_506620.1\| Peroxisomal Membrane Protein related family member (pmp-3) [Caenorhabditis elegans] [NCBI NR] [wormpep67.fasta] CE05518 WBGene00004060 locus:pmp-3 peroxisomal membrane protein (PMP70) status:Confirmed TR:Q18843 protein_id:CAA99810.1 [wormpep150.fasta] 05518 WBGene00004060 locus:pmp-3 peroxisomal membrane protein (PMP70) status:Confirmed TR:Q18843 protein_id:CAA99810.1 [wormpep130-phg-ecoli-orf-rand.fasta] ATP-binding cassette sub-family D member 4 like (75.0 kD) (5P133) [Caenorhabditis elegans]gi\|3875241\|emb\|CAA99810.1\| Hypothetical protein C54G10.3 [Caenorhabditis elegans]gi\|7497944\|pir\|\|T20228 hypothetical protein C54G10.3 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas] peroxisomal membrane protein (PMP70) status:Confirmed TR:Q18843 protein_id:CAA99810.1 [wormpep115.fasta.reversed] CE05518 peroxisomal membrane protein (PMP70) status:Partially_confirmed TR:Q18843 protein_id:CAA99810.1 [wormpep80.hongbin] CE05518 WBGene00004060 locus:pmp-3 peroxisomal membrane protein (PMP70) status:Confirmed UniProt:Q18843_CAEEL protein_id:CAA99810.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE05518 WBGene00004060 locus:pmp-3 peroxisomal membrane protein (PMP70) status:Confirmed UniProt:Q18843_CAEEL protein_id:CAA99810.1\| [wormORF-contam.fasta] Hypothetical protein C54G10.3 [Caenorhabditis elegans] [nr-271106-contam.fasta] Peroxisomal Membrane Protein related family member (pmp-3) [Caenorhabditis elegans] [nr-271106-contam.fasta] CE05518 WBGene00004060 locus:pmp-3 peroxisomal membrane protein (PMP70) status:Confirmed UniProt:Q18843 protein_id:CAA99810.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE05518 WBGene00004060 locus:pmp-3 status:Confirmed UniProt:Q18843 protein_id:CAA99810.1 [wormpep246-ecoli-contam.fasta] Isoform of F5GUC6, Peroxisomal Membrane Protein related OS=Caenorhabditis elegans GN=pmp-3 PE=1 SV=1 [CAEEL.fasta.20160308]
Organism:	Caenorhabditis elegans
Length:	660 amino acids
Gene Ontology:
Cellular Component:	Gram-negative-bacterium-type cell wall [IEA] membrane [IEA] integral to membrane [IEA] outer membrane-bounded periplasmic space [IEA]
Biological Process:	cell division [IEA] cobalt ion transport [IEA] lipid transport [IEA] protein transport [IEA] nitrate transport [IEA] phosphonate transport [IEA] cytochrome complex assembly [IEA] transport [IEA]
Molecular Function:	ATPase activity [IEA] nucleotide binding [IEA] ATP binding [IEA] ATPase activity, coupled to transmembrane movement of substances [IEA] nitrate transmembrane transporter activity [IEA] nucleoside-triphosphatase activity [IEA] protein transporter activity [IEA] phosphonate transmembrane-transporting ATPase activity [IEA] transporter activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARLALDFLF FRRFWRLLKI LFPCHRRSIT AWLAGALLIA TALDQVMTYL VGIQPSLFYV  60
   61 ALGNKDADTF KILCARGAAI ILGKAFTLAV FKYLTNMLAI KSRQVCNLTM HRLYFKRQAF 120
  121 FKLSSSGDML DNPDQRLTQD IEKATRILSN DLLAPIATAP FIIGYYTWLT YESSGWIGPA 180
  181 AIYTYFCIQT IINKMILSPI VQKVSEQEKM EGDFRQRHME VRSNVEAIAF YRAGVLENIM 240
  241 TNQKLKNLIE TQKSLTEWRM VLNSITNVFD YFGGILSYLI IGVPVFITHL YDDVSPAELN 300
  301 GIVSRNAFFY LYLIYSFSTV LKLTGDFGEL AGVTHRVMEL HEELNRLHSD CLETDRPPST 360
  361 VPSSVVVIAS DEDDKSASRH MQEIHGKQMS LERDEQEEEE AQYLLGGKTG QEDDWPDDGV 420
  421 AITVDSATLS PPNDHSHLIV QLLSLQIIQG QTLLITGDSG CGKSSLLRMF AGLWHCSSGK 480
  481 MDCHWRRLTS NLFFLAQKPY FPSGNTTLRQ QIVYPVKALQ VDKDVARITQ ILEWVKMEHL 540
  541 VERCGGLDTP VEWDWMKTLS PGELQRLSLA RVFYTKPRIV FLDESTSAIG FELEMAIYRK 600
  601 LQEEKITFVS IGHRYSLKQF HDMELRVKGR SGEWSLHDID TASIASRTAS FLGADTVLSM 660
  661

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
ATPase activity, coupled to transmembrane movement of substances	5.57844095962502	bayes_pls_golite062009
ATPase activity, coupled to movement of substances	5.57813579764186	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	5.57813579764186	bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity	5.5689620139321	bayes_pls_golite062009
primary active transmembrane transporter activity	5.55992639965745	bayes_pls_golite062009
active transmembrane transporter activity	5.50005167063544	bayes_pls_golite062009
lipid transporter activity	5.43964691043504	bayes_pls_golite062009
ATPase activity, coupled	4.98276715440477	bayes_pls_golite062009
ATPase activity	4.69795387297193	bayes_pls_golite062009
nucleoside-triphosphatase activity	4.45923622153365	bayes_pls_golite062009
pyrophosphatase activity	4.39781350157199	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides	4.38133275795019	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	4.38085303582726	bayes_pls_golite062009
transporter activity	3.71239480053329	bayes_pls_golite062009
hydrolase activity	3.14498892233323	bayes_pls_golite062009
transmembrane transporter activity	3.13960906549884	bayes_pls_golite062009
substrate-specific transporter activity	3.1318898376276	bayes_pls_golite062009
ATP binding	3.01346604299372	bayes_pls_golite062009
adenyl ribonucleotide binding	2.96271391116269	bayes_pls_golite062009
adenyl nucleotide binding	2.91131545957759	bayes_pls_golite062009
purine ribonucleotide binding	2.70262534541085	bayes_pls_golite062009
ribonucleotide binding	2.70178191749524	bayes_pls_golite062009
purine nucleotide binding	2.6583477492092	bayes_pls_golite062009
nucleotide binding	2.62374702628143	bayes_pls_golite062009
binding	1.69327117652379	bayes_pls_golite062009
peptide-transporting ATPase activity	1.37783759788533	bayes_pls_golite062009
peptide transporter activity	1.19353064661766	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	1.08692822631118	bayes_pls_golite062009
ion transmembrane transporter activity	0.977237423302079	bayes_pls_golite062009
motor activity	0.677658554107	bayes_pls_golite062009
cation transmembrane transporter activity	0.557919489256916	bayes_pls_golite062009
long-chain fatty acid transporter activity	0.472705458910899	bayes_pls_golite062009
drug transmembrane transporter activity	0.38711726712063	bayes_pls_golite062009
protein binding	0.378225828131122	bayes_pls_golite062009
fatty acid transporter activity	0.278494397068437	bayes_pls_golite062009
hydrogen ion transporting ATP synthase activity, rotational mechanism	0.213018989352421	bayes_pls_golite062009
cholesterol transporter activity	0.151538546854999	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	0.123304946374679	bayes_pls_golite062009
microtubule motor activity	0.11674780318211	bayes_pls_golite062009
metal ion transmembrane transporter activity	0.0775601177068852	bayes_pls_golite062009
sterol transporter activity	0.0272361898745201	bayes_pls_golite062009

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..660]	PSI-BLAST	104.0	No description for 2hydA was found.

Protein Overview: pmp-3

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: