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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pmp-3
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARLALDFLF FRRFWRLLKI LFPCHRRSIT AWLAGALLIA TALDQVMTYL VGIQPSLFYV  60
   61 ALGNKDADTF KILCARGAAI ILGKAFTLAV FKYLTNMLAI KSRQVCNLTM HRLYFKRQAF 120
  121 FKLSSSGDML DNPDQRLTQD IEKATRILSN DLLAPIATAP FIIGYYTWLT YESSGWIGPA 180
  181 AIYTYFCIQT IINKMILSPI VQKVSEQEKM EGDFRQRHME VRSNVEAIAF YRAGVLENIM 240
  241 TNQKLKNLIE TQKSLTEWRM VLNSITNVFD YFGGILSYLI IGVPVFITHL YDDVSPAELN 300
  301 GIVSRNAFFY LYLIYSFSTV LKLTGDFGEL AGVTHRVMEL HEELNRLHSD CLETDRPPST 360
  361 VPSSVVVIAS DEDDKSASRH MQEIHGKQMS LERDEQEEEE AQYLLGGKTG QEDDWPDDGV 420
  421 AITVDSATLS PPNDHSHLIV QLLSLQIIQG QTLLITGDSG CGKSSLLRMF AGLWHCSSGK 480
  481 MDCHWRRLTS NLFFLAQKPY FPSGNTTLRQ QIVYPVKALQ VDKDVARITQ ILEWVKMEHL 540
  541 VERCGGLDTP VEWDWMKTLS PGELQRLSLA RVFYTKPRIV FLDESTSAIG FELEMAIYRK 600
  601 LQEEKITFVS IGHRYSLKQF HDMELRVKGR SGEWSLHDID TASIASRTAS FLGADTVLSM 660
  661 

YRC Informatics Platform - Version 3.0
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