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Protein Overview: CE03954

General Information:
Name(s) found: CE03954 [WormBase]
Description(s) found:
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  • WBGene00015535 status:Partially_confirmed UniProt:Q17724 protein_id:CCD63341.1 [WormBase]
  • pir||T29798 hypothetical protein C06E4.6 - Caenorhabditis elegans [NCBI NR]
  • gi|17538486|ref|NP_501154.1| hypothetical protein C06E4.6 [Caenorhabditis elegans] [NCBI NR]
  • gi|1086892|gb|AAA82473.1| Hypothetical protein C06E4.6 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE03954 WBGene00015535 dehydrogenase status:Partially_confirmed TR:Q17724 protein_id:AAA82473.1 [wormpep150.fasta]
  • 03954 WBGene00015535 dehydrogenase status:Partially_confirmed TR:Q17724 protein_id:AAA82473.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • short-chain dehydrogenase reductase Mc1 like family member (4I16) [Caenorhabditis elegans]gi|1086892|gb|AAA82473.1| Hypothetical protein C06E4.6 [Caenorhabditis elegans]gi|7495540|pir||T29798 hypothetical protein C06E4.6 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • dehydrogenase status:Partially_confirmed TR:Q17724 protein_id:AAA82473.1 [wormpep115.fasta.reversed]
  • CE03954 dehydrogenase status:Predicted TR:Q17724 protein_id:AAA82473.1 [wormpep80.hongbin]
  • CE03954 WBGene00015535 dehydrogenase status:Partially_confirmed UniProt:Q17724_CAEEL protein_id:AAA82473.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE03954 WBGene00015535 dehydrogenase status:Partially_confirmed UniProt:Q17724_CAEEL protein_id:AAA82473.1| [wormORF-contam.fasta]
  • C06E4.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C06E4.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE03954 WBGene00015535 dehydrogenase status:Partially_confirmed UniProt:Q17724 protein_id:AAA82473.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE03954 WBGene00015535 dehydrogenase status:Partially_confirmed UniProt:Q17724 protein_id:CCD63341.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE03954 WBGene00015535 status:Partially_confirmed UniProt:Q17724 protein_id:CCD63341.1 [wormpep246-ecoli-contam.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=C06E4.6 PE=3 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 274 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: estrogen biosynthetic process [IEALink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    tetrahydrobiopterin biosynthetic process [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    poly-hydroxybutyrate biosynthetic process [IEALink to PubMed article]
    metabolic process [IEALink to PubMed article]
    fatty acid biosynthetic process [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: estradiol 17-beta-dehydrogenase activity [IEALink to PubMed article]
    sepiapterin reductase activity [IEALink to PubMed article]
    3-oxoacyl-[acyl-carrier-protein] reductase activity [IEALink to PubMed article]
    oxidoreductase activity [IEALink to PubMed article]
    NAD or NADH binding [IEALink to PubMed article]
    3-hydroxybutyrate dehydrogenase activity [IEALink to PubMed article]
    acetoacetyl-CoA reductase activity [IEALink to PubMed article]
    2-deoxy-D-gluconate 3-dehydrogenase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARFTDKVAI ITGSSNGIGR ATAVLLATDG AKVTITGRDA ARLEETRQAI LKAGISATNV  60
   61 NSVVADVTTA EGQDLLISST LDKFGKINIL INNAGANIPD SQGQTRTKCS IENLTKMFQL 120
  121 NLQSVVEMVQ KVRPHLAKTR GEIVNISSIG AGPAAQPASP YYSSAKAALD QYSRCAAIDL 180
  181 ISEGIRINVV QPGFVSTGFS TAARGLSADE SVKFYDLMGS LPHCIPAGYC GQPDHLASVI 240
  241 AFLVDRKVSE YIVGQTIIAD GGSSLVIGCH APRQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..274] PSI-BLAST 67.0 Crystal Structure of Glucose Dehydrogenase of Caenorhabditis Elegans in the Apo-Form

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  3.09625241707629 bayes_pls_golite062009
  • 3-hydroxyacyl-CoA dehydrogenase activity
    		•  3.06391460989761 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  3.02758902218302 bayes_pls_golite062009
  • retinol dehydrogenase activity
    		•  2.50453100919665 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  2.01043991420942 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  1.84548524949714 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • steroid dehydrogenase activity
    		•  1.75109362865449 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  1.65338499044318 bayes_pls_golite062009
  • steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  1.55012034958204 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  1.47309297191111 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  1.248916824872 bayes_pls_golite062009
  • fatty acid synthase activity
    		•  1.23679054027553 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  1.1634925015191 bayes_pls_golite062009
  • alcohol binding
    		•  1.07158175924364 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  1.01627645289834 bayes_pls_golite062009
  • alcohol dehydrogenase (NAD) activity
    		•  0.867909552357575 bayes_pls_golite062009
  • binding
    		•  0.784517759335365 bayes_pls_golite062009
  • retinal dehydrogenase activity
    		•  0.69372321031969 bayes_pls_golite062009
  • 3-oxoacyl-[acyl-carrier-protein] reductase activity
    		•  0.604742541607263 bayes_pls_golite062009
  • 3-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity
    		•  0.583772223704381 bayes_pls_golite062009
  • testosterone 17-beta-dehydrogenase activity
    		•  0.532187027260366 bayes_pls_golite062009
  • DNA binding
    		•  0.525227236870065 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.459537641913493 bayes_pls_golite062009
  • enoyl-CoA hydratase activity
    		•  0.439912268968251 bayes_pls_golite062009
  • retinol binding
    		•  0.343379136183648 bayes_pls_golite062009
  • alcohol dehydrogenase activity, zinc-dependent
    		•  0.311551606659739 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.152651308844322 bayes_pls_golite062009
  • ethanol binding
    		•  0.0448614072391299 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle